Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21200

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
2,193,774	+				+1.5
2,193,840	-				-1.1
2,193,872	-				+0.5
2,193,945	+		PGA1_c21190	0.13	+0.5
2,194,082	+		PGA1_c21190	0.28	-0.8
2,194,090	-		PGA1_c21190	0.29	+0.2
2,194,090	-				+2.5
2,194,090	-		PGA1_c21190	0.29	-0.8
2,194,090	-		PGA1_c21190	0.29	+1.5
2,194,091	-		PGA1_c21190	0.29	-0.8
2,194,092	+		PGA1_c21190	0.29	+0.8
2,194,092	+		PGA1_c21190	0.29	-1.1
2,194,092	+		PGA1_c21190	0.29	+1.8
2,194,092	+		PGA1_c21190	0.29	-0.1
2,194,092	+		PGA1_c21190	0.29	+2.5
2,194,092	+		PGA1_c21190	0.29	-0.1
2,194,095	-		PGA1_c21190	0.29	-1.3
2,194,205	+		PGA1_c21190	0.41	+3.1
2,194,288	+		PGA1_c21190	0.50	+2.5
2,194,293	+		PGA1_c21190	0.50	+1.5
2,194,368	+		PGA1_c21190	0.58	-0.1
2,194,390	-		PGA1_c21190	0.61	-0.1
2,194,490	-		PGA1_c21190	0.71	-0.5
2,194,520	-		PGA1_c21190	0.75	-0.1
2,194,520	-		PGA1_c21190	0.75	-1.1
2,194,643	-		PGA1_c21190	0.88	+0.7
2,194,658	+		PGA1_c21190	0.89	+0.2
2,194,743	-				-0.1
2,194,756	+				-0.1
2,194,838	-				-0.1
2,195,130	+		PGA1_c21200	0.26	-0.8
2,195,130	+		PGA1_c21200	0.26	-0.5
2,195,138	-		PGA1_c21200	0.26	-0.8
2,195,159	+		PGA1_c21200	0.28	+2.5
2,195,159	+		PGA1_c21200	0.28	-1.1
2,195,164	+		PGA1_c21200	0.28	-0.5
2,195,172	-		PGA1_c21200	0.29	+0.5
2,195,188	+		PGA1_c21200	0.30	+2.5
2,195,198	+		PGA1_c21200	0.31	-0.8
2,195,218	+		PGA1_c21200	0.32	-0.1
2,195,228	+		PGA1_c21200	0.33	-0.3
2,195,243	-		PGA1_c21200	0.34	+1.5
2,195,296	-		PGA1_c21200	0.37	+2.5
2,195,418	-		PGA1_c21200	0.46	-0.1
2,195,480	-		PGA1_c21200	0.50	+1.5
2,195,504	+		PGA1_c21200	0.52	-1.1
2,195,512	+		PGA1_c21200	0.53	-1.1
2,195,517	+		PGA1_c21200	0.53	+0.9
2,195,561	+		PGA1_c21200	0.56	-1.5
2,195,568	-		PGA1_c21200	0.57	+0.5
2,195,669	-		PGA1_c21200	0.64	+0.5
2,195,699	-		PGA1_c21200	0.66	-0.8
2,195,761	-		PGA1_c21200	0.70	-0.8
2,195,783	-		PGA1_c21200	0.72	+0.5
2,195,788	-		PGA1_c21200	0.72	+0.5
2,195,873	+		PGA1_c21200	0.78	+2.1
2,195,881	-		PGA1_c21200	0.79	-0.8
2,195,881	-		PGA1_c21200	0.79	+1.5
2,195,920	+		PGA1_c21200	0.81	+0.1
2,195,947	+		PGA1_c21200	0.83	+1.8
2,195,955	-		PGA1_c21200	0.84	+1.5
2,195,955	-		PGA1_c21200	0.84	+0.5
2,195,956	-		PGA1_c21200	0.84	-0.8
2,195,956	-		PGA1_c21200	0.84	-1.3
2,195,958	+		PGA1_c21200	0.84	-0.1
2,195,999	+		PGA1_c21200	0.87	+0.5
2,195,999	+		PGA1_c21200	0.87	+0.9
2,195,999	+		PGA1_c21200	0.87	-0.1
2,195,999	+		PGA1_c21200	0.87	-0.5
2,196,007	-		PGA1_c21200	0.87	+0.5
2,196,046	-				+0.5
2,196,056	+				+0.8
2,196,087	-				-0.5
2,196,161	+				-0.5
2,196,220	+				+0.9
2,196,229	-				-0.1
2,196,257	-				-0.8
2,196,258	-				-0.5
2,196,280	+				+1.5
2,196,281	+				-1.5
2,196,281	+				-1.3
2,196,281	+				+0.2
2,196,289	-				-1.1
2,196,289	-				+0.1
2,196,289	-				-1.6
2,196,302	-				+0.5
2,196,418	-		PGA1_c21210	0.24	+1.5
2,196,450	-		PGA1_c21210	0.31	-0.8
2,196,482	-		PGA1_c21210	0.38	+1.5
2,196,517	+		PGA1_c21210	0.47	+0.1
2,196,555	+		PGA1_c21210	0.55	-0.5
2,196,602	-		PGA1_c21210	0.66	+0.9
2,196,702	+		PGA1_c21210	0.90	+0.1
2,196,710	+				+0.7
2,196,710	+				-1.1
2,196,755	-				+1.9
2,196,764	-				+2.1
2,196,792	-				+1.5
2,196,792	-				+2.1
2,196,840	+				-0.1
2,196,849	+				+0.5
2,196,857	-				-1.3
2,196,857	-				-0.3
2,196,862	+				+0.5
2,196,864	+				+0.2
2,196,870	-				+1.5
2,196,993	+				+0.5
2,197,001	-				-1.1
2,197,083	+				-0.9
2,197,147	+				+0.9