Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16180

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
1,679,261	-		PGA1_c16170	0.71	-0.1
1,679,283	+		PGA1_c16170	0.72	-1.4
1,679,283	+		PGA1_c16170	0.72	+0.8
1,679,301	-		PGA1_c16170	0.73	-0.1
1,679,334	+		PGA1_c16170	0.74	+1.5
1,679,342	-		PGA1_c16170	0.74	+0.5
1,679,438	-		PGA1_c16170	0.78	+0.1
1,679,477	+		PGA1_c16170	0.80	+0.5
1,679,556	-		PGA1_c16170	0.83	+0.6
1,679,556	-		PGA1_c16170	0.83	-0.9
1,679,621	+		PGA1_c16170	0.85	-0.9
1,679,714	-		PGA1_c16170	0.89	+1.2
1,679,836	+				-1.4
1,679,852	+				-1.4
1,679,862	+				-0.9
1,680,058	+				+1.5
1,680,119	+				+0.9
1,680,120	+				-0.9
1,680,166	+				-0.7
1,680,176	+				-1.4
1,680,176	+				-0.1
1,680,194	-				+0.8
1,680,196	+				+1.0
1,680,196	+				-1.4
1,680,199	-				-0.1
1,680,209	-				+0.5
1,680,274	+				+0.1
1,680,282	-				-0.1
1,680,289	+		PGA1_c16180	0.10	+0.2
1,680,341	+		PGA1_c16180	0.16	-1.1
1,680,342	-		PGA1_c16180	0.16	+1.9
1,680,388	+		PGA1_c16180	0.21	+0.1
1,680,574	+		PGA1_c16180	0.40	+0.0
1,680,574	+		PGA1_c16180	0.40	-1.1
1,680,574	+		PGA1_c16180	0.40	-2.2
1,680,582	-		PGA1_c16180	0.41	-1.1
1,680,582	-		PGA1_c16180	0.41	+0.1
1,680,604	-		PGA1_c16180	0.43	-0.9
1,680,689	-		PGA1_c16180	0.52	-0.1
1,680,799	+		PGA1_c16180	0.63	+0.5
1,680,950	-		PGA1_c16180	0.79	-1.5
1,681,094	-				-0.1
1,681,139	+				+0.5
1,681,149	+				-0.2
1,681,157	-				-0.9
1,681,157	-				+0.5
1,681,158	-				-0.1
1,681,227	-				-2.0
1,681,289	+				-0.5
1,681,296	-				-0.5
1,681,323	-				-0.7
1,681,325	+				-2.0
1,681,326	+				-0.7
1,681,333	-				-0.8
1,681,333	-				+0.5
1,681,366	-				-0.4
1,681,372	-				-1.0
1,681,423	-				-0.3
1,681,468	-				+0.2
1,681,473	+				+0.9
1,681,535	-		PGA1_c16190	0.33	-2.2
1,681,535	-		PGA1_c16190	0.33	-0.7
1,681,557	-		PGA1_c16190	0.46	-0.5
1,681,713	-				+0.5
1,681,747	+				+1.5
1,681,747	+				+0.2
1,681,836	+				-1.2
1,681,913	+				-0.5
1,681,914	-				-0.4
1,681,920	+				+0.2
1,681,921	-				+0.5
1,681,928	-				+0.3
1,682,091	+		PGA1_c16200	0.27	+0.3
1,682,098	+		PGA1_c16200	0.28	+1.5
1,682,113	+		PGA1_c16200	0.30	-0.2
1,682,135	+		PGA1_c16200	0.33	-0.6