Experiment: m.b. Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_767 and HP15_768 are separated by 51 nucleotides HP15_768 and HP15_769 are separated by 3 nucleotides HP15_769 and HP15_770 are separated by 158 nucleotides
HP15_767: HP15_767 - peptide chain release factor 2, at 777,609 to 778,664
_767
HP15_768: HP15_768 - lysyl-tRNA synthetase, at 778,716 to 780,251
_768
HP15_769: HP15_769 - uracil-DNA glycosylase, at 780,255 to 780,989
_769
HP15_770: HP15_770 - signal transduction protein, at 781,148 to 781,981
_770
Position (kb) 778
779
780
781 Strain fitness (log2 ratio) -1
0
1
2 at 780.284 kb on + strand at 780.284 kb on + strand at 780.284 kb on + strand at 780.284 kb on + strand at 780.292 kb on - strand at 780.390 kb on + strand, within HP15_769 at 780.398 kb on - strand, within HP15_769 at 780.398 kb on - strand, within HP15_769 at 780.398 kb on - strand, within HP15_769 at 780.413 kb on - strand, within HP15_769 at 780.423 kb on - strand, within HP15_769 at 780.438 kb on + strand, within HP15_769 at 780.438 kb on + strand, within HP15_769 at 780.446 kb on - strand, within HP15_769 at 780.446 kb on - strand, within HP15_769 at 780.482 kb on - strand, within HP15_769 at 780.487 kb on + strand, within HP15_769 at 780.617 kb on + strand, within HP15_769 at 780.622 kb on + strand, within HP15_769 at 780.630 kb on - strand, within HP15_769 at 780.635 kb on - strand, within HP15_769 at 780.682 kb on + strand, within HP15_769 at 780.692 kb on + strand, within HP15_769 at 780.762 kb on - strand, within HP15_769 at 780.819 kb on + strand, within HP15_769 at 780.819 kb on - strand, within HP15_769 at 780.896 kb on + strand, within HP15_769 at 780.915 kb on - strand, within HP15_769 at 780.998 kb on - strand at 781.007 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.5 mg/ml remove 780,284 + +0.3 780,284 + +0.8 780,284 + +0.3 780,284 + -0.6 780,292 - +0.7 780,390 + HP15_769 0.18 +0.2 780,398 - HP15_769 0.19 -0.7 780,398 - HP15_769 0.19 +1.9 780,398 - HP15_769 0.19 +0.1 780,413 - HP15_769 0.21 -0.2 780,423 - HP15_769 0.23 +0.8 780,438 + HP15_769 0.25 +0.9 780,438 + HP15_769 0.25 -1.5 780,446 - HP15_769 0.26 -0.3 780,446 - HP15_769 0.26 +0.2 780,482 - HP15_769 0.31 +0.1 780,487 + HP15_769 0.32 +0.5 780,617 + HP15_769 0.49 +0.6 780,622 + HP15_769 0.50 -0.3 780,630 - HP15_769 0.51 +0.1 780,635 - HP15_769 0.52 +0.3 780,682 + HP15_769 0.58 -0.1 780,692 + HP15_769 0.59 -1.0 780,762 - HP15_769 0.69 -0.1 780,819 + HP15_769 0.77 +0.0 780,819 - HP15_769 0.77 -0.4 780,896 + HP15_769 0.87 +0.0 780,915 - HP15_769 0.90 -0.8 780,998 - -0.1 781,007 + +0.8
Or see this region's nucleotide sequence