Experiment: m.b. Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3188 and HP15_3189 are separated by 83 nucleotides HP15_3189 and HP15_3190 are separated by 20 nucleotides HP15_3190 and HP15_3191 are separated by 125 nucleotides
HP15_3188: HP15_3188 - conserved hypothetical protein, at 3,344,160 to 3,345,083
_3188
HP15_3189: HP15_3189 - conserved hypothetical protein, at 3,345,167 to 3,345,916
_3189
HP15_3190: HP15_3190 - polyhydroxyalkanoic acid system protein, at 3,345,937 to 3,346,215
_3190
HP15_3191: HP15_3191 - ubiquinone/menaquinone biosynthesis methyltransferase UbiE, at 3,346,341 to 3,347,132
_3191
Position (kb)
3345
3346 Strain fitness (log2 ratio)
-2
-1
0
1 at 3344.453 kb on + strand, within HP15_3188 at 3344.485 kb on + strand, within HP15_3188 at 3344.525 kb on - strand, within HP15_3188 at 3344.525 kb on - strand, within HP15_3188 at 3344.633 kb on + strand, within HP15_3188 at 3344.633 kb on - strand, within HP15_3188 at 3344.645 kb on + strand, within HP15_3188 at 3344.653 kb on - strand, within HP15_3188 at 3344.665 kb on - strand, within HP15_3188 at 3344.676 kb on - strand, within HP15_3188 at 3344.696 kb on + strand, within HP15_3188 at 3344.704 kb on - strand, within HP15_3188 at 3344.722 kb on - strand, within HP15_3188 at 3344.798 kb on + strand, within HP15_3188 at 3344.852 kb on + strand, within HP15_3188 at 3344.888 kb on - strand, within HP15_3188 at 3344.934 kb on + strand, within HP15_3188 at 3344.949 kb on + strand, within HP15_3188 at 3345.016 kb on + strand at 3345.077 kb on + strand at 3345.085 kb on - strand at 3345.110 kb on - strand at 3345.121 kb on + strand at 3345.144 kb on - strand at 3345.146 kb on + strand at 3345.166 kb on + strand at 3345.191 kb on + strand at 3345.199 kb on - strand at 3345.383 kb on + strand, within HP15_3189 at 3345.402 kb on - strand, within HP15_3189 at 3345.479 kb on - strand, within HP15_3189 at 3345.567 kb on + strand, within HP15_3189 at 3345.648 kb on + strand, within HP15_3189 at 3345.694 kb on + strand, within HP15_3189 at 3345.769 kb on - strand, within HP15_3189 at 3345.784 kb on + strand, within HP15_3189 at 3345.851 kb on - strand at 3345.876 kb on + strand at 3345.910 kb on + strand at 3345.910 kb on + strand at 3345.934 kb on + strand at 3345.942 kb on - strand at 3346.070 kb on + strand, within HP15_3190 at 3346.070 kb on - strand, within HP15_3190 at 3346.090 kb on - strand, within HP15_3190 at 3346.143 kb on - strand, within HP15_3190 at 3346.176 kb on + strand, within HP15_3190 at 3346.269 kb on - strand at 3346.279 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.5 mg/ml remove 3,344,453 + HP15_3188 0.32 -0.7 3,344,485 + HP15_3188 0.35 +0.6 3,344,525 - HP15_3188 0.40 +0.1 3,344,525 - HP15_3188 0.40 -0.3 3,344,633 + HP15_3188 0.51 -0.6 3,344,633 - HP15_3188 0.51 +0.1 3,344,645 + HP15_3188 0.52 -0.5 3,344,653 - HP15_3188 0.53 +1.4 3,344,665 - HP15_3188 0.55 +0.6 3,344,676 - HP15_3188 0.56 +0.1 3,344,696 + HP15_3188 0.58 -0.4 3,344,704 - HP15_3188 0.59 -0.9 3,344,722 - HP15_3188 0.61 -0.1 3,344,798 + HP15_3188 0.69 +0.1 3,344,852 + HP15_3188 0.75 -0.5 3,344,888 - HP15_3188 0.79 +0.4 3,344,934 + HP15_3188 0.84 +0.8 3,344,949 + HP15_3188 0.85 -1.0 3,345,016 + +0.9 3,345,077 + -1.2 3,345,085 - -0.4 3,345,110 - +0.3 3,345,121 + -0.4 3,345,144 - -1.0 3,345,146 + -0.4 3,345,166 + +0.1 3,345,191 + -0.6 3,345,199 - -1.2 3,345,383 + HP15_3189 0.29 -0.8 3,345,402 - HP15_3189 0.31 +0.6 3,345,479 - HP15_3189 0.42 -0.7 3,345,567 + HP15_3189 0.53 -0.8 3,345,648 + HP15_3189 0.64 -1.2 3,345,694 + HP15_3189 0.70 -0.9 3,345,769 - HP15_3189 0.80 -1.1 3,345,784 + HP15_3189 0.82 -0.7 3,345,851 - -1.2 3,345,876 + +0.1 3,345,910 + -0.0 3,345,910 + +0.1 3,345,934 + -0.6 3,345,942 - +0.1 3,346,070 + HP15_3190 0.48 +0.6 3,346,070 - HP15_3190 0.48 -0.3 3,346,090 - HP15_3190 0.55 +0.2 3,346,143 - HP15_3190 0.74 -0.4 3,346,176 + HP15_3190 0.86 -0.5 3,346,269 - -0.8 3,346,279 + -1.9
Or see this region's nucleotide sequence