Experiment: m.b. Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3134 and HP15_3135 overlap by 17 nucleotides HP15_3135 and HP15_3136 are separated by 44 nucleotides
HP15_3134: HP15_3134 - two-component system sensor protein, at 3,285,829 to 3,287,595
_3134
HP15_3135: HP15_3135 - ethanol oxidation regulatory protein ercA (from data) , at 3,287,579 to 3,288,742
_3135
HP15_3136: HP15_3136 - prolyl oligopeptidase family protein, at 3,288,787 to 3,290,571
_3136
Position (kb)
3287
3288
3289 Strain fitness (log2 ratio)
-2
-1
0
1 at 3286.580 kb on + strand, within HP15_3134 at 3286.586 kb on - strand, within HP15_3134 at 3286.594 kb on + strand, within HP15_3134 at 3286.599 kb on + strand, within HP15_3134 at 3286.602 kb on - strand, within HP15_3134 at 3286.604 kb on + strand, within HP15_3134 at 3286.685 kb on + strand, within HP15_3134 at 3286.690 kb on + strand, within HP15_3134 at 3286.693 kb on - strand, within HP15_3134 at 3286.797 kb on - strand, within HP15_3134 at 3286.815 kb on - strand, within HP15_3134 at 3286.846 kb on + strand, within HP15_3134 at 3286.846 kb on + strand, within HP15_3134 at 3286.854 kb on - strand, within HP15_3134 at 3286.854 kb on - strand, within HP15_3134 at 3286.885 kb on - strand, within HP15_3134 at 3286.894 kb on - strand, within HP15_3134 at 3286.896 kb on + strand, within HP15_3134 at 3286.896 kb on + strand, within HP15_3134 at 3286.896 kb on + strand, within HP15_3134 at 3286.904 kb on - strand, within HP15_3134 at 3286.904 kb on - strand, within HP15_3134 at 3286.904 kb on - strand, within HP15_3134 at 3286.904 kb on - strand, within HP15_3134 at 3286.918 kb on + strand, within HP15_3134 at 3286.995 kb on + strand, within HP15_3134 at 3287.003 kb on - strand, within HP15_3134 at 3287.027 kb on - strand, within HP15_3134 at 3287.061 kb on + strand, within HP15_3134 at 3287.061 kb on + strand, within HP15_3134 at 3287.061 kb on + strand, within HP15_3134 at 3287.069 kb on - strand, within HP15_3134 at 3287.069 kb on - strand, within HP15_3134 at 3287.069 kb on - strand, within HP15_3134 at 3287.120 kb on - strand, within HP15_3134 at 3287.120 kb on - strand, within HP15_3134 at 3287.331 kb on + strand, within HP15_3134 at 3287.339 kb on - strand, within HP15_3134 at 3287.339 kb on - strand, within HP15_3134 at 3287.344 kb on - strand, within HP15_3134 at 3287.406 kb on + strand, within HP15_3134 at 3287.411 kb on + strand, within HP15_3134 at 3287.487 kb on - strand at 3287.492 kb on + strand at 3287.500 kb on - strand at 3287.560 kb on - strand at 3287.682 kb on - strand at 3287.724 kb on + strand, within HP15_3135 at 3287.845 kb on - strand, within HP15_3135 at 3287.845 kb on - strand, within HP15_3135 at 3287.862 kb on + strand, within HP15_3135 at 3287.882 kb on - strand, within HP15_3135 at 3287.892 kb on - strand, within HP15_3135 at 3287.939 kb on + strand, within HP15_3135 at 3287.939 kb on + strand, within HP15_3135 at 3287.939 kb on + strand, within HP15_3135 at 3287.984 kb on - strand, within HP15_3135 at 3288.168 kb on - strand, within HP15_3135 at 3288.204 kb on - strand, within HP15_3135 at 3288.354 kb on - strand, within HP15_3135 at 3288.425 kb on + strand, within HP15_3135 at 3288.425 kb on + strand, within HP15_3135 at 3288.425 kb on + strand, within HP15_3135 at 3288.433 kb on - strand, within HP15_3135 at 3288.433 kb on - strand, within HP15_3135 at 3288.433 kb on - strand, within HP15_3135 at 3288.519 kb on - strand, within HP15_3135 at 3288.536 kb on + strand, within HP15_3135 at 3288.536 kb on + strand, within HP15_3135 at 3288.541 kb on - strand, within HP15_3135 at 3288.679 kb on - strand at 3288.749 kb on + strand at 3288.772 kb on + strand at 3288.964 kb on + strand at 3288.967 kb on - strand, within HP15_3136 at 3288.977 kb on + strand, within HP15_3136 at 3288.983 kb on + strand, within HP15_3136 at 3288.983 kb on + strand, within HP15_3136 at 3288.991 kb on - strand, within HP15_3136 at 3288.991 kb on - strand, within HP15_3136 at 3288.991 kb on - strand, within HP15_3136 at 3289.017 kb on - strand, within HP15_3136 at 3289.121 kb on - strand, within HP15_3136 at 3289.127 kb on + strand, within HP15_3136 at 3289.128 kb on - strand, within HP15_3136 at 3289.135 kb on - strand, within HP15_3136 at 3289.135 kb on - strand, within HP15_3136 at 3289.158 kb on + strand, within HP15_3136 at 3289.193 kb on + strand, within HP15_3136 at 3289.212 kb on + strand, within HP15_3136 at 3289.232 kb on - strand, within HP15_3136 at 3289.242 kb on + strand, within HP15_3136 at 3289.245 kb on - strand, within HP15_3136 at 3289.277 kb on - strand, within HP15_3136 at 3289.277 kb on - strand, within HP15_3136 at 3289.531 kb on + strand, within HP15_3136 at 3289.612 kb on - strand, within HP15_3136 at 3289.631 kb on + strand, within HP15_3136 at 3289.636 kb on + strand, within HP15_3136
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.5 mg/ml remove 3,286,580 + HP15_3134 0.43 -0.8 3,286,586 - HP15_3134 0.43 +0.5 3,286,594 + HP15_3134 0.43 -1.2 3,286,599 + HP15_3134 0.44 -0.0 3,286,602 - HP15_3134 0.44 -1.6 3,286,604 + HP15_3134 0.44 -1.6 3,286,685 + HP15_3134 0.48 -1.2 3,286,690 + HP15_3134 0.49 -0.6 3,286,693 - HP15_3134 0.49 -1.0 3,286,797 - HP15_3134 0.55 -1.9 3,286,815 - HP15_3134 0.56 -1.3 3,286,846 + HP15_3134 0.58 -0.8 3,286,846 + HP15_3134 0.58 +0.3 3,286,854 - HP15_3134 0.58 +0.1 3,286,854 - HP15_3134 0.58 -0.3 3,286,885 - HP15_3134 0.60 -0.2 3,286,894 - HP15_3134 0.60 -0.5 3,286,896 + HP15_3134 0.60 -1.1 3,286,896 + HP15_3134 0.60 -0.9 3,286,896 + HP15_3134 0.60 -0.3 3,286,904 - HP15_3134 0.61 +0.1 3,286,904 - HP15_3134 0.61 -1.1 3,286,904 - HP15_3134 0.61 -0.5 3,286,904 - HP15_3134 0.61 -1.3 3,286,918 + HP15_3134 0.62 -0.9 3,286,995 + HP15_3134 0.66 -0.3 3,287,003 - HP15_3134 0.66 -0.3 3,287,027 - HP15_3134 0.68 +1.1 3,287,061 + HP15_3134 0.70 -0.6 3,287,061 + HP15_3134 0.70 -1.0 3,287,061 + HP15_3134 0.70 -0.8 3,287,069 - HP15_3134 0.70 +1.4 3,287,069 - HP15_3134 0.70 +0.2 3,287,069 - HP15_3134 0.70 -1.1 3,287,120 - HP15_3134 0.73 +0.1 3,287,120 - HP15_3134 0.73 -0.1 3,287,331 + HP15_3134 0.85 -0.8 3,287,339 - HP15_3134 0.85 -0.6 3,287,339 - HP15_3134 0.85 +0.2 3,287,344 - HP15_3134 0.86 -0.3 3,287,406 + HP15_3134 0.89 -0.7 3,287,411 + HP15_3134 0.90 -0.9 3,287,487 - -0.9 3,287,492 + -0.4 3,287,500 - -0.2 3,287,560 - -0.1 3,287,682 - -0.8 3,287,724 + HP15_3135 0.12 -1.4 3,287,845 - HP15_3135 0.23 +0.6 3,287,845 - HP15_3135 0.23 -1.3 3,287,862 + HP15_3135 0.24 -0.9 3,287,882 - HP15_3135 0.26 -0.3 3,287,892 - HP15_3135 0.27 -0.8 3,287,939 + HP15_3135 0.31 -0.9 3,287,939 + HP15_3135 0.31 +0.3 3,287,939 + HP15_3135 0.31 -0.2 3,287,984 - HP15_3135 0.35 -0.7 3,288,168 - HP15_3135 0.51 -1.4 3,288,204 - HP15_3135 0.54 -1.8 3,288,354 - HP15_3135 0.67 -0.6 3,288,425 + HP15_3135 0.73 -0.5 3,288,425 + HP15_3135 0.73 -1.0 3,288,425 + HP15_3135 0.73 -0.2 3,288,433 - HP15_3135 0.73 -0.6 3,288,433 - HP15_3135 0.73 +1.1 3,288,433 - HP15_3135 0.73 -1.1 3,288,519 - HP15_3135 0.81 -0.8 3,288,536 + HP15_3135 0.82 -1.1 3,288,536 + HP15_3135 0.82 +0.3 3,288,541 - HP15_3135 0.83 -1.3 3,288,679 - -1.8 3,288,749 + -1.6 3,288,772 + -1.4 3,288,964 + -1.3 3,288,967 - HP15_3136 0.10 -0.3 3,288,977 + HP15_3136 0.11 -1.1 3,288,983 + HP15_3136 0.11 +0.1 3,288,983 + HP15_3136 0.11 -0.6 3,288,991 - HP15_3136 0.11 -0.2 3,288,991 - HP15_3136 0.11 -0.5 3,288,991 - HP15_3136 0.11 +0.3 3,289,017 - HP15_3136 0.13 -0.4 3,289,121 - HP15_3136 0.19 -0.1 3,289,127 + HP15_3136 0.19 +0.0 3,289,128 - HP15_3136 0.19 +1.1 3,289,135 - HP15_3136 0.19 -0.3 3,289,135 - HP15_3136 0.19 -1.3 3,289,158 + HP15_3136 0.21 -0.4 3,289,193 + HP15_3136 0.23 -0.6 3,289,212 + HP15_3136 0.24 -0.1 3,289,232 - HP15_3136 0.25 +0.5 3,289,242 + HP15_3136 0.25 -0.1 3,289,245 - HP15_3136 0.26 +0.3 3,289,277 - HP15_3136 0.27 -1.3 3,289,277 - HP15_3136 0.27 -0.2 3,289,531 + HP15_3136 0.42 +0.2 3,289,612 - HP15_3136 0.46 -0.1 3,289,631 + HP15_3136 0.47 -0.2 3,289,636 + HP15_3136 0.48 +0.1
Or see this region's nucleotide sequence