Experiment: m.b. Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2773 and HP15_2774 are separated by 20 nucleotides HP15_2774 and HP15_2775 are separated by 57 nucleotides HP15_2775 and HP15_2776 are separated by 82 nucleotides
HP15_2773: HP15_2773 - conserved hypothetical protein, membrane, at 2,926,325 to 2,926,780
_2773
HP15_2774: HP15_2774 - DSBA oxidoreductase, at 2,926,801 to 2,927,448
_2774
HP15_2775: HP15_2775 - transcriptional regulator protein, LysR family, at 2,927,506 to 2,928,399
_2775
HP15_2776: HP15_2776 - membrane protein containing DUF6, transmembrane, at 2,928,482 to 2,929,384
_2776
Position (kb)
2927
2928
2929 Strain fitness (log2 ratio)
-2
-1
0
1 at 2926.621 kb on + strand, within HP15_2773 at 2926.724 kb on + strand, within HP15_2773 at 2926.802 kb on + strand at 2926.872 kb on + strand, within HP15_2774 at 2926.913 kb on - strand, within HP15_2774 at 2926.988 kb on - strand, within HP15_2774 at 2927.015 kb on + strand, within HP15_2774 at 2927.028 kb on - strand, within HP15_2774 at 2927.107 kb on - strand, within HP15_2774 at 2927.107 kb on - strand, within HP15_2774 at 2927.109 kb on + strand, within HP15_2774 at 2927.241 kb on - strand, within HP15_2774 at 2927.281 kb on + strand, within HP15_2774 at 2927.301 kb on + strand, within HP15_2774 at 2927.313 kb on + strand, within HP15_2774 at 2927.363 kb on + strand, within HP15_2774 at 2927.488 kb on + strand at 2927.546 kb on - strand at 2927.556 kb on - strand at 2927.654 kb on - strand, within HP15_2775 at 2927.735 kb on - strand, within HP15_2775 at 2927.735 kb on - strand, within HP15_2775 at 2927.786 kb on + strand, within HP15_2775 at 2927.804 kb on - strand, within HP15_2775 at 2927.833 kb on - strand, within HP15_2775 at 2927.938 kb on + strand, within HP15_2775 at 2927.960 kb on + strand, within HP15_2775 at 2927.984 kb on - strand, within HP15_2775 at 2928.001 kb on - strand, within HP15_2775 at 2928.105 kb on + strand, within HP15_2775 at 2928.208 kb on + strand, within HP15_2775 at 2928.222 kb on - strand, within HP15_2775 at 2928.231 kb on - strand, within HP15_2775 at 2928.234 kb on - strand, within HP15_2775 at 2928.270 kb on + strand, within HP15_2775 at 2928.437 kb on - strand at 2928.487 kb on - strand at 2928.508 kb on - strand at 2928.567 kb on + strand at 2928.567 kb on + strand at 2928.631 kb on - strand, within HP15_2776 at 2928.636 kb on - strand, within HP15_2776 at 2928.679 kb on + strand, within HP15_2776 at 2928.759 kb on + strand, within HP15_2776 at 2928.759 kb on + strand, within HP15_2776 at 2928.813 kb on + strand, within HP15_2776 at 2928.813 kb on + strand, within HP15_2776 at 2928.816 kb on + strand, within HP15_2776 at 2928.820 kb on - strand, within HP15_2776 at 2928.820 kb on - strand, within HP15_2776 at 2928.831 kb on + strand, within HP15_2776 at 2928.999 kb on - strand, within HP15_2776 at 2929.058 kb on - strand, within HP15_2776 at 2929.127 kb on - strand, within HP15_2776 at 2929.152 kb on + strand, within HP15_2776 at 2929.232 kb on - strand, within HP15_2776
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.5 mg/ml remove 2,926,621 + HP15_2773 0.65 -0.3 2,926,724 + HP15_2773 0.88 +0.4 2,926,802 + -0.2 2,926,872 + HP15_2774 0.11 +0.5 2,926,913 - HP15_2774 0.17 -0.4 2,926,988 - HP15_2774 0.29 -0.2 2,927,015 + HP15_2774 0.33 +0.4 2,927,028 - HP15_2774 0.35 -0.8 2,927,107 - HP15_2774 0.47 -0.4 2,927,107 - HP15_2774 0.47 -0.4 2,927,109 + HP15_2774 0.48 -0.4 2,927,241 - HP15_2774 0.68 -1.4 2,927,281 + HP15_2774 0.74 +0.4 2,927,301 + HP15_2774 0.77 +0.8 2,927,313 + HP15_2774 0.79 +0.7 2,927,363 + HP15_2774 0.87 -0.4 2,927,488 + +0.6 2,927,546 - +0.7 2,927,556 - -0.1 2,927,654 - HP15_2775 0.17 -0.4 2,927,735 - HP15_2775 0.26 +1.2 2,927,735 - HP15_2775 0.26 -1.7 2,927,786 + HP15_2775 0.31 +0.9 2,927,804 - HP15_2775 0.33 -0.1 2,927,833 - HP15_2775 0.37 -0.4 2,927,938 + HP15_2775 0.48 -0.1 2,927,960 + HP15_2775 0.51 -0.4 2,927,984 - HP15_2775 0.53 -0.7 2,928,001 - HP15_2775 0.55 +0.9 2,928,105 + HP15_2775 0.67 +0.1 2,928,208 + HP15_2775 0.79 -0.8 2,928,222 - HP15_2775 0.80 -0.4 2,928,231 - HP15_2775 0.81 -1.4 2,928,234 - HP15_2775 0.81 -1.1 2,928,270 + HP15_2775 0.85 -0.0 2,928,437 - +0.3 2,928,487 - +0.6 2,928,508 - +0.0 2,928,567 + -2.3 2,928,567 + +0.2 2,928,631 - HP15_2776 0.17 +0.6 2,928,636 - HP15_2776 0.17 -0.2 2,928,679 + HP15_2776 0.22 +0.2 2,928,759 + HP15_2776 0.31 -0.7 2,928,759 + HP15_2776 0.31 -0.5 2,928,813 + HP15_2776 0.37 -0.6 2,928,813 + HP15_2776 0.37 +0.6 2,928,816 + HP15_2776 0.37 -2.1 2,928,820 - HP15_2776 0.37 +0.1 2,928,820 - HP15_2776 0.37 -0.2 2,928,831 + HP15_2776 0.39 +0.3 2,928,999 - HP15_2776 0.57 +0.5 2,929,058 - HP15_2776 0.64 -0.4 2,929,127 - HP15_2776 0.71 -0.6 2,929,152 + HP15_2776 0.74 -0.9 2,929,232 - HP15_2776 0.83 -0.2
Or see this region's nucleotide sequence