Experiment: m.b. Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1917 and HP15_1918 overlap by 4 nucleotides HP15_1918 and HP15_1919 overlap by 1 nucleotides
HP15_1917: HP15_1917 - glycosyl transferase, family 2, at 2,032,336 to 2,033,511
_1917
HP15_1918: HP15_1918 - PEP-CTERM system-associated, FemAB-related protein, at 2,033,508 to 2,034,569
_1918
HP15_1919: HP15_1919 - protein involved in cellulose biosynthesis (CelD)-like protein, at 2,034,569 to 2,035,693
_1919
Position (kb)
2033
2034
2035 Strain fitness (log2 ratio)
-1
0
1
2 at 2032.509 kb on + strand, within HP15_1917 at 2032.517 kb on - strand, within HP15_1917 at 2032.517 kb on - strand, within HP15_1917 at 2032.693 kb on - strand, within HP15_1917 at 2033.160 kb on - strand, within HP15_1917 at 2033.210 kb on - strand, within HP15_1917 at 2033.380 kb on + strand, within HP15_1917 at 2033.389 kb on - strand, within HP15_1917 at 2033.389 kb on - strand, within HP15_1917 at 2033.685 kb on - strand, within HP15_1918 at 2033.876 kb on - strand, within HP15_1918 at 2033.877 kb on + strand, within HP15_1918 at 2033.936 kb on + strand, within HP15_1918 at 2033.944 kb on - strand, within HP15_1918 at 2034.036 kb on - strand, within HP15_1918 at 2034.176 kb on - strand, within HP15_1918 at 2034.426 kb on + strand, within HP15_1918 at 2034.434 kb on - strand, within HP15_1918 at 2034.513 kb on + strand at 2034.526 kb on + strand at 2034.628 kb on + strand at 2034.628 kb on + strand at 2034.632 kb on + strand at 2034.634 kb on + strand at 2034.636 kb on - strand at 2034.644 kb on + strand at 2034.932 kb on + strand, within HP15_1919 at 2034.940 kb on - strand, within HP15_1919 at 2035.144 kb on + strand, within HP15_1919 at 2035.154 kb on + strand, within HP15_1919 at 2035.197 kb on - strand, within HP15_1919 at 2035.386 kb on - strand, within HP15_1919 at 2035.388 kb on + strand, within HP15_1919 at 2035.480 kb on + strand, within HP15_1919 at 2035.488 kb on - strand, within HP15_1919
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.5 mg/ml remove 2,032,509 + HP15_1917 0.15 -0.4 2,032,517 - HP15_1917 0.15 -1.2 2,032,517 - HP15_1917 0.15 -1.7 2,032,693 - HP15_1917 0.30 -0.5 2,033,160 - HP15_1917 0.70 -0.1 2,033,210 - HP15_1917 0.74 -0.2 2,033,380 + HP15_1917 0.89 -1.7 2,033,389 - HP15_1917 0.90 +0.4 2,033,389 - HP15_1917 0.90 +0.3 2,033,685 - HP15_1918 0.17 +1.4 2,033,876 - HP15_1918 0.35 -1.5 2,033,877 + HP15_1918 0.35 -0.8 2,033,936 + HP15_1918 0.40 -0.4 2,033,944 - HP15_1918 0.41 -0.6 2,034,036 - HP15_1918 0.50 -0.4 2,034,176 - HP15_1918 0.63 +0.3 2,034,426 + HP15_1918 0.86 +0.1 2,034,434 - HP15_1918 0.87 +0.6 2,034,513 + +0.2 2,034,526 + -1.0 2,034,628 + +0.9 2,034,628 + +1.2 2,034,632 + +0.6 2,034,634 + -0.8 2,034,636 - -1.7 2,034,644 + -0.2 2,034,932 + HP15_1919 0.32 +0.0 2,034,940 - HP15_1919 0.33 -1.6 2,035,144 + HP15_1919 0.51 +0.4 2,035,154 + HP15_1919 0.52 +0.5 2,035,197 - HP15_1919 0.56 +2.2 2,035,386 - HP15_1919 0.73 -0.7 2,035,388 + HP15_1919 0.73 -0.5 2,035,480 + HP15_1919 0.81 -0.5 2,035,488 - HP15_1919 0.82 +0.8
Or see this region's nucleotide sequence