Strain Fitness in Shewanella amazonensis SB2B around Sama_2370

Experiment: Thymidine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymidine
2,846,443	+		Sama_2369	0.11	+0.2
2,846,444	-		Sama_2369	0.11	+0.3
2,846,517	+		Sama_2369	0.18	+0.3
2,846,518	-		Sama_2369	0.18	+0.2
2,846,518	-		Sama_2369	0.18	+0.0
2,846,522	-		Sama_2369	0.18	-3.0
2,846,522	-		Sama_2369	0.18	-0.8
2,846,522	-		Sama_2369	0.18	-1.0
2,846,538	+		Sama_2369	0.20	+0.5
2,846,539	-		Sama_2369	0.20	-1.1
2,846,539	-		Sama_2369	0.20	+1.4
2,846,574	+		Sama_2369	0.23	-0.4
2,846,575	-		Sama_2369	0.23	-0.8
2,846,575	-		Sama_2369	0.23	-0.3
2,846,575	-		Sama_2369	0.23	-0.9
2,846,575	-		Sama_2369	0.23	+0.8
2,846,614	+		Sama_2369	0.27	-0.5
2,846,614	+		Sama_2369	0.27	-0.0
2,846,614	+		Sama_2369	0.27	+1.2
2,846,614	+		Sama_2369	0.27	+0.4
2,846,614	+		Sama_2369	0.27	+0.3
2,846,614	+		Sama_2369	0.27	-1.1
2,846,620	+		Sama_2369	0.27	+0.9
2,846,620	+		Sama_2369	0.27	-2.7
2,846,620	+		Sama_2369	0.27	+0.0
2,846,621	-		Sama_2369	0.27	+0.3
2,846,623	+		Sama_2369	0.28	+1.2
2,846,624	-		Sama_2369	0.28	+0.2
2,846,624	-		Sama_2369	0.28	-1.1
2,846,669	+		Sama_2369	0.32	-1.1
2,846,669	+		Sama_2369	0.32	-2.0
2,846,737	+		Sama_2369	0.38	-1.6
2,846,738	-		Sama_2369	0.38	+1.8
2,846,792	+		Sama_2369	0.43	+1.2
2,846,792	+		Sama_2369	0.43	-1.6
2,846,793	-		Sama_2369	0.44	-1.1
2,846,793	-		Sama_2369	0.44	+0.2
2,846,793	-		Sama_2369	0.44	+0.6
2,846,793	-		Sama_2369	0.44	+0.2
2,846,793	-		Sama_2369	0.44	-0.3
2,846,793	-		Sama_2369	0.44	-0.8
2,846,983	+		Sama_2369	0.61	+1.9
2,846,983	+		Sama_2369	0.61	+1.2
2,847,025	+		Sama_2369	0.65	-0.0
2,847,025	+		Sama_2369	0.65	-0.6
2,847,025	+		Sama_2369	0.65	-0.6
2,847,048	+		Sama_2369	0.67	+1.6
2,847,049	-		Sama_2369	0.67	+0.2
2,847,056	-		Sama_2369	0.68	+2.2
2,847,056	-		Sama_2369	0.68	-1.1
2,847,062	-		Sama_2369	0.69	-0.1
2,847,062	-		Sama_2369	0.69	-1.4
2,847,082	+		Sama_2369	0.70	+0.6
2,847,082	+		Sama_2369	0.70	+0.5
2,847,082	+		Sama_2369	0.70	+0.2
2,847,210	-		Sama_2369	0.82	+0.5
2,847,301	+				-0.5
2,847,426	+				-0.0
2,847,427	-				+1.2
2,847,427	-				+0.9
2,847,430	-				-1.0
2,847,430	-				-0.0
2,847,430	-				-0.4
2,847,455	+				-0.4
2,847,455	+				+0.1
2,847,455	+				+0.8
2,847,455	+				+0.0
2,847,455	+				-0.5
2,847,456	-				+0.2
2,847,456	-				-3.4
2,847,456	-				-1.0
2,847,458	+				-2.0
2,847,458	+				-3.3
2,847,458	+				+0.1
2,847,552	+				-2.4
2,847,553	-				-0.4
2,847,592	-				+0.5
2,847,677	+		Sama_2370	0.14	+0.1
2,847,678	-		Sama_2370	0.14	+0.0
2,847,692	-		Sama_2370	0.15	-0.8
2,847,692	-		Sama_2370	0.15	-0.7
2,847,714	+		Sama_2370	0.16	-1.1
2,847,715	-		Sama_2370	0.16	-1.8
2,847,744	+		Sama_2370	0.18	-0.5
2,847,745	-		Sama_2370	0.18	-0.2
2,847,814	+		Sama_2370	0.22	+1.1
2,847,814	+		Sama_2370	0.22	-0.1
2,847,891	-		Sama_2370	0.26	+0.9
2,847,891	-		Sama_2370	0.26	-0.2
2,847,891	-		Sama_2370	0.26	+1.2
2,847,894	-		Sama_2370	0.26	+0.2
2,847,894	-		Sama_2370	0.26	+1.6
2,847,894	-		Sama_2370	0.26	-0.7
2,847,907	+		Sama_2370	0.27	-0.5
2,847,927	+		Sama_2370	0.28	+0.8
2,847,927	+		Sama_2370	0.28	-1.9
2,847,928	-		Sama_2370	0.28	+0.3
2,848,042	+		Sama_2370	0.35	-0.7
2,848,077	+		Sama_2370	0.37	+0.3
2,848,077	+		Sama_2370	0.37	-0.6
2,848,077	+		Sama_2370	0.37	+0.1
2,848,078	-		Sama_2370	0.37	-0.2
2,848,078	-		Sama_2370	0.37	-0.4
2,848,078	-		Sama_2370	0.37	+2.2
2,848,078	-		Sama_2370	0.37	-0.1
2,848,078	-		Sama_2370	0.37	+0.5
2,848,078	-		Sama_2370	0.37	-0.9
2,848,084	+		Sama_2370	0.37	-0.2
2,848,084	+		Sama_2370	0.37	-2.2
2,848,084	+		Sama_2370	0.37	-1.5
2,848,084	+		Sama_2370	0.37	-0.8
2,848,084	+		Sama_2370	0.37	+0.5
2,848,085	-		Sama_2370	0.37	-0.5
2,848,085	-		Sama_2370	0.37	+0.2
2,848,149	+		Sama_2370	0.41	-0.3
2,848,149	+		Sama_2370	0.41	-0.2
2,848,149	+		Sama_2370	0.41	+0.1
2,848,149	+		Sama_2370	0.41	+0.2
2,848,149	+		Sama_2370	0.41	-2.1
2,848,150	-		Sama_2370	0.41	-0.7
2,848,150	-		Sama_2370	0.41	-0.8
2,848,156	+		Sama_2370	0.42	-0.8
2,848,251	+		Sama_2370	0.47	+0.0
2,848,252	-		Sama_2370	0.47	-0.1
2,848,252	-		Sama_2370	0.47	-0.4
2,848,268	+		Sama_2370	0.48	+0.9
2,848,268	+		Sama_2370	0.48	+0.1
2,848,317	+		Sama_2370	0.51	+0.2
2,848,317	+		Sama_2370	0.51	-0.2
2,848,318	-		Sama_2370	0.51	+1.2
2,848,318	-		Sama_2370	0.51	-0.4
2,848,318	-		Sama_2370	0.51	+1.2
2,848,330	+		Sama_2370	0.52	-2.1
2,848,343	+		Sama_2370	0.52	-0.6
2,848,343	+		Sama_2370	0.52	-0.4
2,848,344	-		Sama_2370	0.52	-0.0
2,848,344	-		Sama_2370	0.52	+0.9
2,848,432	+		Sama_2370	0.58	-0.4
2,848,473	+		Sama_2370	0.60	+0.2
2,848,473	+		Sama_2370	0.60	-0.4
2,848,473	+		Sama_2370	0.60	-0.6
2,848,473	+		Sama_2370	0.60	-1.4
2,848,473	+		Sama_2370	0.60	+0.6
2,848,474	-		Sama_2370	0.60	-0.8
2,848,474	-		Sama_2370	0.60	-1.6
2,848,474	-		Sama_2370	0.60	+0.3
2,848,474	-		Sama_2370	0.60	-2.1
2,848,477	+		Sama_2370	0.60	+0.4
2,848,477	+		Sama_2370	0.60	+0.4
2,848,477	+		Sama_2370	0.60	-1.8
2,848,477	+		Sama_2370	0.60	-0.5
2,848,477	+		Sama_2370	0.60	+0.5
2,848,478	-		Sama_2370	0.60	-0.2
2,848,518	+		Sama_2370	0.63	-1.3
2,848,564	+		Sama_2370	0.65	-1.0
2,848,564	+		Sama_2370	0.65	-0.2
2,848,565	-		Sama_2370	0.65	-1.0
2,848,616	+		Sama_2370	0.68	+0.0
2,848,616	+		Sama_2370	0.68	-1.0
2,848,616	+		Sama_2370	0.68	-1.6
2,848,616	+		Sama_2370	0.68	-0.4
2,848,617	-		Sama_2370	0.68	+0.5
2,848,617	-		Sama_2370	0.68	-0.2
2,848,663	+		Sama_2370	0.71	+0.6
2,848,664	-		Sama_2370	0.71	-0.2
2,848,705	+		Sama_2370	0.73	-0.2
2,848,705	+		Sama_2370	0.73	-1.8
2,848,761	-		Sama_2370	0.77	+1.3
2,848,761	-		Sama_2370	0.77	-1.3
2,848,761	-		Sama_2370	0.77	-0.8
2,848,778	+		Sama_2370	0.78	-0.8
2,848,778	+		Sama_2370	0.78	+0.9
2,848,778	+		Sama_2370	0.78	-0.4
2,848,779	-		Sama_2370	0.78	-0.8
2,848,823	-		Sama_2370	0.80	-0.4
2,848,859	+		Sama_2370	0.82	+0.2
2,848,859	+		Sama_2370	0.82	-0.3
2,848,860	-		Sama_2370	0.82	+0.5
2,848,861	+		Sama_2370	0.83	-0.1
2,848,861	+		Sama_2370	0.83	-2.0
2,848,862	-		Sama_2370	0.83	-0.5
2,848,862	-		Sama_2370	0.83	-1.5
2,848,873	+		Sama_2370	0.83	-0.2
2,848,873	+		Sama_2370	0.83	+0.4
2,848,873	+		Sama_2370	0.83	+0.8
2,848,873	+		Sama_2370	0.83	+0.7
2,848,873	+		Sama_2370	0.83	-0.2
2,848,874	-		Sama_2370	0.83	+0.1
2,848,874	-		Sama_2370	0.83	-1.0
2,848,874	-		Sama_2370	0.83	-1.3
2,848,874	-		Sama_2370	0.83	-0.3
2,848,877	+		Sama_2370	0.83	-0.7
2,848,877	+		Sama_2370	0.83	-0.3
2,848,877	+		Sama_2370	0.83	+1.2
2,848,877	+		Sama_2370	0.83	-1.8
2,848,878	-		Sama_2370	0.84	+0.3
2,848,878	-		Sama_2370	0.84	-0.8
2,848,878	-		Sama_2370	0.84	-0.4
2,848,883	+		Sama_2370	0.84	-0.7
2,848,883	+		Sama_2370	0.84	+0.3
2,848,883	+		Sama_2370	0.84	+0.3
2,848,883	+		Sama_2370	0.84	-0.3
2,848,883	+		Sama_2370	0.84	-1.9
2,848,884	-		Sama_2370	0.84	-2.0
2,848,884	-		Sama_2370	0.84	+1.2
2,848,940	-		Sama_2370	0.87	-1.0
2,848,956	+		Sama_2370	0.88	+1.6
2,848,956	+		Sama_2370	0.88	+0.2
2,848,973	+		Sama_2370	0.89	-0.1
2,848,973	+		Sama_2370	0.89	-0.6
2,848,973	+		Sama_2370	0.89	-0.6
2,848,973	+		Sama_2370	0.89	-0.1
2,848,973	+		Sama_2370	0.89	+0.2
2,848,973	+		Sama_2370	0.89	-0.3
2,848,973	+		Sama_2370	0.89	-0.2
2,848,973	+		Sama_2370	0.89	-0.3
2,848,973	+		Sama_2370	0.89	-1.6
2,848,973	+		Sama_2370	0.89	+1.0
2,848,973	+		Sama_2370	0.89	-0.1
2,848,974	-		Sama_2370	0.89	-1.5
2,848,974	-		Sama_2370	0.89	-1.1
2,848,974	-		Sama_2370	0.89	+0.3
2,848,974	-		Sama_2370	0.89	-1.5
2,848,974	-		Sama_2370	0.89	+2.1
2,848,974	-		Sama_2370	0.89	-2.4
2,848,974	-		Sama_2370	0.89	+1.0
2,849,018	+				+1.5
2,849,018	+				+1.2
2,849,018	+				-2.1
2,849,018	+				+0.2
2,849,018	+				+1.0
2,849,019	-				+0.0
2,849,054	-				-2.2
2,849,064	+				-1.6
2,849,064	+				+1.5
2,849,064	+				-0.6
2,849,065	-				+0.6
2,849,141	+				-1.1
2,849,141	+				+0.4
2,849,298	+		Sama_2371	0.13	-1.1
2,849,298	+		Sama_2371	0.13	-1.1
2,849,299	-		Sama_2371	0.13	+0.9
2,849,299	-		Sama_2371	0.13	+0.2
2,849,393	+		Sama_2371	0.23	+1.4
2,849,404	+		Sama_2371	0.24	+1.9
2,849,404	+		Sama_2371	0.24	-0.0
2,849,404	+		Sama_2371	0.24	-1.0
2,849,404	+		Sama_2371	0.24	+2.0
2,849,405	-		Sama_2371	0.24	+1.8
2,849,405	-		Sama_2371	0.24	+1.1
2,849,456	-		Sama_2371	0.30	+0.2
2,849,492	+		Sama_2371	0.33	+0.2
2,849,492	+		Sama_2371	0.33	+0.4
2,849,492	+		Sama_2371	0.33	-0.1
2,849,493	-		Sama_2371	0.33	-0.4
2,849,574	+		Sama_2371	0.42	+1.2
2,849,575	-		Sama_2371	0.42	-1.0
2,849,575	-		Sama_2371	0.42	-0.6
2,849,575	-		Sama_2371	0.42	+0.1
2,849,575	-		Sama_2371	0.42	-0.1
2,849,577	+		Sama_2371	0.42	+1.3
2,849,577	+		Sama_2371	0.42	+1.2
2,849,577	+		Sama_2371	0.42	+0.0
2,849,620	+		Sama_2371	0.47	+0.6
2,849,621	-		Sama_2371	0.47	-1.4
2,849,621	-		Sama_2371	0.47	-0.1
2,849,621	-		Sama_2371	0.47	+0.6
2,849,651	+		Sama_2371	0.50	-0.3
2,849,651	+		Sama_2371	0.50	-0.8
2,849,652	-		Sama_2371	0.50	-0.4
2,849,652	-		Sama_2371	0.50	-0.4
2,849,652	-		Sama_2371	0.50	-0.4
2,849,655	+		Sama_2371	0.50	-0.1
2,849,656	-		Sama_2371	0.50	-0.4
2,849,656	-		Sama_2371	0.50	+0.4
2,849,656	-		Sama_2371	0.50	-1.1
2,849,656	-		Sama_2371	0.50	-0.2
2,849,656	-		Sama_2371	0.50	-0.4
2,849,731	+		Sama_2371	0.58	+0.2
2,849,732	-		Sama_2371	0.58	+0.0
2,849,734	+		Sama_2371	0.58	-0.4
2,849,735	-		Sama_2371	0.59	+0.8
2,849,821	+		Sama_2371	0.67	+1.2
2,849,821	+		Sama_2371	0.67	-0.1
2,849,822	-		Sama_2371	0.68	+0.6
2,849,822	-		Sama_2371	0.68	+1.5
2,849,846	+		Sama_2371	0.70	+0.0
2,849,846	+		Sama_2371	0.70	+0.6
2,849,846	+		Sama_2371	0.70	+1.2
2,849,846	+		Sama_2371	0.70	-0.5
2,849,847	-		Sama_2371	0.70	-1.0
2,849,847	-		Sama_2371	0.70	+0.2
2,849,848	+		Sama_2371	0.70	+0.8
2,849,848	+		Sama_2371	0.70	+1.0
2,849,848	+		Sama_2371	0.70	+1.5
2,849,848	+		Sama_2371	0.70	+1.9
2,849,849	-		Sama_2371	0.70	-0.8
2,849,849	-		Sama_2371	0.70	+0.7
2,849,849	-		Sama_2371	0.70	-1.4
2,849,849	-		Sama_2371	0.70	-0.5
2,849,888	+		Sama_2371	0.74	-0.8
2,849,888	+		Sama_2371	0.74	+1.2
2,849,888	+		Sama_2371	0.74	+0.9
2,849,888	+		Sama_2371	0.74	+0.1
2,849,888	+		Sama_2371	0.74	-0.7
2,849,888	+		Sama_2371	0.74	+0.7
2,849,888	+		Sama_2371	0.74	-0.1
2,849,888	+		Sama_2371	0.74	+0.3
2,849,888	+		Sama_2371	0.74	+0.1
2,849,888	+		Sama_2371	0.74	+1.2
2,849,888	+		Sama_2371	0.74	+1.6
2,849,888	+		Sama_2371	0.74	-0.3
2,849,888	+		Sama_2371	0.74	+1.0
2,849,888	+		Sama_2371	0.74	-0.5
2,849,888	+		Sama_2371	0.74	-1.3
2,849,888	+		Sama_2371	0.74	-0.1
2,849,888	+		Sama_2371	0.74	+1.1
2,849,889	-		Sama_2371	0.75	-1.6
2,849,889	-		Sama_2371	0.75	-1.6
2,849,889	-		Sama_2371	0.75	-1.0
2,849,889	-		Sama_2371	0.75	-0.4
2,849,889	-		Sama_2371	0.75	-0.5
2,849,889	-		Sama_2371	0.75	+0.4
2,849,889	-		Sama_2371	0.75	-0.0
2,849,889	-		Sama_2371	0.75	-0.8
2,849,889	-		Sama_2371	0.75	-0.4
2,849,889	-		Sama_2371	0.75	+0.3
2,849,889	-		Sama_2371	0.75	-0.5
2,849,889	-		Sama_2371	0.75	+0.7
2,849,889	-		Sama_2371	0.75	+1.8
2,849,889	-		Sama_2371	0.75	+0.6
2,849,892	+		Sama_2371	0.75	-0.2
2,849,892	+		Sama_2371	0.75	-0.2
2,849,893	-		Sama_2371	0.75	-0.5
2,849,893	-		Sama_2371	0.75	-0.1
2,849,893	-		Sama_2371	0.75	+0.6
2,849,893	-		Sama_2371	0.75	+0.4
2,849,893	-		Sama_2371	0.75	-1.1
2,849,893	-		Sama_2371	0.75	-0.5
2,849,893	-		Sama_2371	0.75	+1.6
2,849,926	+		Sama_2371	0.78	-0.1
2,849,936	+		Sama_2371	0.79	+0.1
2,849,937	-		Sama_2371	0.80	+0.5
2,849,937	-		Sama_2371	0.80	-1.0
2,849,937	-		Sama_2371	0.80	-0.6
2,850,045	+				+1.7
2,850,046	-				-0.6
2,850,069	-				+1.1
2,850,084	-				+1.2
2,850,084	-				+0.6
2,850,084	-				-1.9
2,850,084	-				-0.1
2,850,126	-				+0.2
2,850,126	-				-0.5
2,850,126	-				+0.8