Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3392

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
3,559,337	+		Psest_3389	0.89	+0.5
3,559,337	+		Psest_3389	0.89	+0.9
3,559,338	-				+0.5
3,559,338	-				-0.2
3,559,338	-				-0.9
3,559,359	-				+0.7
3,559,416	+				+0.3
3,559,416	+				-0.8
3,559,416	+				-0.9
3,559,416	+				-0.4
3,559,416	+				-0.1
3,559,416	+				-0.1
3,559,417	-				+0.5
3,559,417	-				-0.1
3,559,533	-		Psest_3390	0.12	+3.7
3,559,533	-		Psest_3390	0.12	+0.2
3,559,533	-		Psest_3390	0.12	+0.6
3,559,553	+		Psest_3390	0.16	+0.7
3,559,553	+		Psest_3390	0.16	-0.2
3,559,553	+		Psest_3390	0.16	-0.5
3,559,554	-		Psest_3390	0.16	+0.4
3,559,702	-		Psest_3390	0.40	-0.7
3,559,702	-		Psest_3390	0.40	-2.6
3,559,705	+		Psest_3390	0.40	-0.4
3,559,705	+		Psest_3390	0.40	+0.0
3,559,705	+		Psest_3390	0.40	-1.0
3,559,705	+		Psest_3390	0.40	-0.2
3,559,705	+		Psest_3390	0.40	-0.6
3,559,705	+		Psest_3390	0.40	+0.0
3,559,705	+		Psest_3390	0.40	-0.2
3,559,705	+		Psest_3390	0.40	+3.3
3,559,705	+		Psest_3390	0.40	-0.7
3,559,705	+		Psest_3390	0.40	-0.2
3,559,705	+		Psest_3390	0.40	-0.2
3,559,705	+		Psest_3390	0.40	-0.3
3,559,705	+		Psest_3390	0.40	+0.5
3,559,705	+		Psest_3390	0.40	-2.3
3,559,706	-		Psest_3390	0.40	+0.9
3,559,706	-		Psest_3390	0.40	+1.2
3,559,706	-		Psest_3390	0.40	+0.1
3,559,706	-		Psest_3390	0.40	+0.7
3,559,706	-		Psest_3390	0.40	-0.1
3,559,706	-		Psest_3390	0.40	+0.3
3,559,706	-		Psest_3390	0.40	+0.8
3,559,706	-		Psest_3390	0.40	-0.5
3,559,757	+		Psest_3390	0.49	-0.4
3,559,758	-		Psest_3390	0.49	+0.4
3,560,030	+				+0.1
3,560,030	+				-0.9
3,560,030	+				-0.1
3,560,030	+				-0.7
3,560,288	+		Psest_3391	0.77	-0.8
3,560,288	+		Psest_3391	0.77	+0.2
3,560,289	-		Psest_3391	0.78	+0.0
3,560,289	-		Psest_3391	0.78	-0.5
3,560,404	-				-0.7
3,560,404	-				-0.8
3,560,476	+		Psest_3392	0.10	-0.2
3,560,476	+		Psest_3392	0.10	-0.7
3,560,476	+		Psest_3392	0.10	+0.4
3,560,527	+		Psest_3392	0.14	-0.6
3,560,527	+		Psest_3392	0.14	-0.1
3,560,527	+		Psest_3392	0.14	+0.0
3,560,566	+		Psest_3392	0.16	-0.0
3,560,566	+		Psest_3392	0.16	+0.0
3,560,566	+		Psest_3392	0.16	-0.4
3,560,566	+		Psest_3392	0.16	-1.3
3,560,584	+		Psest_3392	0.17	+0.0
3,560,671	+		Psest_3392	0.23	-0.3
3,560,671	+		Psest_3392	0.23	-1.7
3,560,671	+		Psest_3392	0.23	-0.0
3,560,672	-		Psest_3392	0.23	+0.3
3,560,672	-		Psest_3392	0.23	-0.1
3,560,672	-		Psest_3392	0.23	-0.4
3,560,672	-		Psest_3392	0.23	+0.6
3,560,672	-		Psest_3392	0.23	+0.1
3,560,672	-		Psest_3392	0.23	+0.0
3,560,684	-		Psest_3392	0.24	+0.3
3,560,721	+		Psest_3392	0.26	-0.1
3,560,721	+		Psest_3392	0.26	-0.1
3,560,721	+		Psest_3392	0.26	-1.5
3,560,721	+		Psest_3392	0.26	-0.4
3,560,722	-		Psest_3392	0.26	-0.4
3,560,722	-		Psest_3392	0.26	-0.7
3,560,756	+		Psest_3392	0.29	-1.0
3,560,767	+		Psest_3392	0.29	-1.0
3,560,768	-		Psest_3392	0.29	-0.6
3,560,834	-		Psest_3392	0.34	-0.2
3,560,834	-		Psest_3392	0.34	-2.6
3,560,856	-		Psest_3392	0.35	-0.5
3,560,902	+		Psest_3392	0.38	-0.1
3,560,902	+		Psest_3392	0.38	-0.3
3,560,903	-		Psest_3392	0.38	-0.7
3,560,903	-		Psest_3392	0.38	+0.0
3,560,917	+		Psest_3392	0.39	-1.2
3,560,917	+		Psest_3392	0.39	-1.0
3,560,917	+		Psest_3392	0.39	+1.0
3,560,918	-		Psest_3392	0.39	-0.8
3,561,364	-		Psest_3392	0.68	-0.7
3,561,394	+		Psest_3392	0.70	-0.2
3,561,486	-		Psest_3392	0.76	-0.9
3,561,634	+		Psest_3392	0.86	-0.5
3,561,634	+		Psest_3392	0.86	-1.2
3,561,635	-		Psest_3392	0.86	-0.5
3,561,809	+				+0.5
3,561,809	+				+0.8
3,561,809	+				+0.6
3,561,810	-				+0.2
3,561,810	-				-2.3
3,561,810	-				+0.3
3,561,810	-				+0.8
3,562,090	-		Psest_3393	0.62	+0.0
3,562,109	+		Psest_3393	0.68	+0.2
3,562,109	+		Psest_3393	0.68	+0.3
3,562,109	+		Psest_3393	0.68	-0.4
3,562,109	+		Psest_3393	0.68	+0.3
3,562,110	-		Psest_3393	0.68	+0.2
3,562,110	-		Psest_3393	0.68	-1.1
3,562,110	-		Psest_3393	0.68	+0.3
3,562,124	+		Psest_3393	0.73	-0.7
3,562,124	+		Psest_3393	0.73	+0.1
3,562,124	+		Psest_3393	0.73	+0.8
3,562,124	+		Psest_3393	0.73	+0.5
3,562,124	+		Psest_3393	0.73	+0.7
3,562,124	+		Psest_3393	0.73	+1.1
3,562,124	+		Psest_3393	0.73	+0.8
3,562,124	+		Psest_3393	0.73	-0.2
3,562,124	+		Psest_3393	0.73	-1.4
3,562,124	+		Psest_3393	0.73	-0.1
3,562,124	+		Psest_3393	0.73	-0.1
3,562,124	+		Psest_3393	0.73	-0.2
3,562,125	-		Psest_3393	0.73	-1.5
3,562,125	-		Psest_3393	0.73	+0.5
3,562,125	-		Psest_3393	0.73	-0.4
3,562,125	-		Psest_3393	0.73	-0.0
3,562,125	-		Psest_3393	0.73	+0.2
3,562,125	-		Psest_3393	0.73	-1.6
3,562,125	-		Psest_3393	0.73	-0.6
3,562,125	-		Psest_3393	0.73	-0.8
3,562,125	-		Psest_3393	0.73	+0.2
3,562,125	-		Psest_3393	0.73	+0.3
3,562,125	-		Psest_3393	0.73	+0.2
3,562,125	-		Psest_3393	0.73	+0.8
3,562,125	-		Psest_3393	0.73	-1.1
3,562,125	-		Psest_3393	0.73	+0.0
3,562,125	-		Psest_3393	0.73	+0.5
3,562,125	-		Psest_3393	0.73	+0.0
3,562,125	-		Psest_3393	0.73	-0.1
3,562,164	+		Psest_3393	0.86	-1.0
3,562,165	-		Psest_3393	0.86	-0.2
3,562,165	-		Psest_3393	0.86	-0.9
3,562,202	+				-0.1
3,562,202	+				+0.1
3,562,202	+				+0.1
3,562,202	+				-0.7
3,562,202	+				+1.8
3,562,202	+				-1.7
3,562,202	+				-0.1
3,562,202	+				-1.0
3,562,202	+				+0.3
3,562,202	+				-0.8
3,562,202	+				-0.7
3,562,202	+				-0.0
3,562,202	+				-0.6
3,562,202	+				+1.6
3,562,202	+				-0.1
3,562,202	+				-0.2
3,562,202	+				+0.9
3,562,203	-				-2.0
3,562,203	-				+0.6
3,562,203	-				+0.1
3,562,203	-				-1.7
3,562,203	-				-0.1
3,562,203	-				-0.0
3,562,203	-				+0.1
3,562,203	-				+2.3
3,562,203	-				-0.2
3,562,203	-				-0.5
3,562,203	-				+0.4
3,562,203	-				+1.3
3,562,203	-				+0.6
3,562,203	-				+0.4
3,562,203	-				+0.5
3,562,203	-				+1.3
3,562,203	-				-0.4
3,562,203	-				+0.1
3,562,203	-				+0.1
3,562,203	-				-1.9
3,562,287	+				-1.4
3,562,351	+				-0.9
3,562,351	+				+0.3
3,562,352	-				-0.7
3,562,352	-				+1.3
3,562,375	-		Psest_3394	0.10	+0.7
3,562,400	-		Psest_3394	0.15	-0.1
3,562,400	-		Psest_3394	0.15	-1.6
3,562,406	+		Psest_3394	0.16	+0.3
3,562,406	+		Psest_3394	0.16	-0.6
3,562,406	+		Psest_3394	0.16	-0.3
3,562,406	+		Psest_3394	0.16	-0.7
3,562,406	+		Psest_3394	0.16	-0.7
3,562,406	+		Psest_3394	0.16	+0.6
3,562,406	+		Psest_3394	0.16	-0.9
3,562,406	+		Psest_3394	0.16	-3.1
3,562,406	+		Psest_3394	0.16	-0.3
3,562,406	+		Psest_3394	0.16	+0.8
3,562,406	+		Psest_3394	0.16	+0.3
3,562,406	+		Psest_3394	0.16	+2.6
3,562,407	-		Psest_3394	0.17	-0.9
3,562,407	-		Psest_3394	0.17	-0.2
3,562,407	-		Psest_3394	0.17	-0.9
3,562,407	-		Psest_3394	0.17	-0.1
3,562,407	-		Psest_3394	0.17	-0.9
3,562,407	-		Psest_3394	0.17	+1.9
3,562,407	-		Psest_3394	0.17	-0.9
3,562,407	-		Psest_3394	0.17	+0.9
3,562,407	-		Psest_3394	0.17	+1.1
3,562,407	-		Psest_3394	0.17	+0.3
3,562,407	-		Psest_3394	0.17	-0.6
3,562,407	-		Psest_3394	0.17	-1.5
3,562,407	-		Psest_3394	0.17	+0.5
3,562,407	-		Psest_3394	0.17	+0.1
3,562,449	+		Psest_3394	0.25	-0.3
3,562,449	+		Psest_3394	0.25	-0.1
3,562,449	+		Psest_3394	0.25	+1.3
3,562,756	+		Psest_3394	0.88	+0.3
3,562,756	+		Psest_3394	0.88	-0.7
3,562,756	+		Psest_3394	0.88	+0.3
3,562,756	+		Psest_3394	0.88	-0.4
3,562,756	+		Psest_3394	0.88	-0.0
3,562,756	+		Psest_3394	0.88	+2.8
3,562,757	-		Psest_3394	0.88	-0.9
3,562,757	-		Psest_3394	0.88	-0.2
3,562,757	-		Psest_3394	0.88	+1.0
3,562,757	-		Psest_3394	0.88	+0.2
3,562,757	-		Psest_3394	0.88	+0.4
3,562,786	+				+0.4
3,562,786	+				+0.3
3,562,787	-				-0.0
3,562,787	-				+1.5
3,562,787	-				+0.1
3,562,787	-				-0.2
3,562,787	-				+1.1
3,562,850	+				-2.0
3,562,850	+				-0.4
3,562,851	-				+0.3