Strain Fitness in Marinobacter adhaerens HP15 around HP15_1436
Experiment: m.b. Phosphomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Phosphomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,512,968 | - | HP15_1434 | 0.25 | +1.1 | |
1,513,017 | - | HP15_1434 | 0.40 | +0.1 | |
1,513,024 | - | HP15_1434 | 0.42 | -0.3 | |
1,513,073 | + | HP15_1434 | 0.57 | -1.3 | |
1,513,095 | + | HP15_1434 | 0.64 | -0.0 | |
1,513,121 | - | HP15_1434 | 0.72 | +0.6 | |
1,513,141 | - | HP15_1434 | 0.79 | -0.1 | |
1,513,417 | - | HP15_1435 | 0.12 | -0.2 | |
1,513,486 | - | HP15_1435 | 0.26 | +1.3 | |
1,513,626 | - | HP15_1435 | 0.55 | -0.3 | |
1,513,683 | + | HP15_1435 | 0.67 | +0.5 | |
1,513,691 | + | HP15_1435 | 0.69 | -0.0 | |
1,513,691 | - | HP15_1435 | 0.69 | +0.2 | |
1,513,691 | - | HP15_1435 | 0.69 | -0.0 | |
1,513,734 | + | HP15_1435 | 0.78 | +0.4 | |
1,513,759 | + | HP15_1435 | 0.83 | +0.8 | |
1,513,801 | - | -0.3 | |||
1,513,912 | + | +1.8 | |||
1,513,983 | - | HP15_1436 | 0.28 | -0.8 | |
1,514,052 | - | HP15_1436 | 0.52 | +1.1 | |
1,514,089 | + | HP15_1436 | 0.65 | +0.8 | |
1,514,155 | + | HP15_1436 | 0.87 | +1.1 | |
1,514,163 | - | +0.0 | |||
1,514,216 | - | +1.3 | |||
1,514,257 | + | +2.6 | |||
1,514,340 | + | HP15_1437 | 0.11 | -0.0 | |
1,514,497 | - | HP15_1437 | 0.29 | -0.3 | |
1,514,667 | + | HP15_1437 | 0.49 | +0.8 | |
1,514,756 | + | HP15_1437 | 0.60 | +1.1 | |
1,514,788 | + | HP15_1437 | 0.63 | -0.2 | |
1,514,813 | - | HP15_1437 | 0.66 | +0.1 |
Or see this region's nucleotide sequence