Strain Fitness in Dechlorosoma suillum PS around Dsui_2863

Experiment: Anaero. lactate (C), chlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2862 and Dsui_2863 are separated by 26 nucleotidesDsui_2863 and Dsui_2864 are separated by 123 nucleotides Dsui_2862: Dsui_2862 - peptide chain release factor 2, at 3,052,841 to 3,053,945 _2862 Dsui_2863: Dsui_2863 - lysyl-tRNA synthetase (class II), at 3,053,972 to 3,055,474 _2863 Dsui_2864: Dsui_2864 - signal transduction histidine kinase, at 3,055,598 to 3,058,393 _2864 Position (kb) 3053 3054 3055 3056Strain fitness (log2 ratio) -1 0 1 2at 3053.926 kb on + strandat 3055.625 kb on + strandat 3055.655 kb on - strandat 3055.876 kb on + strandat 3056.037 kb on - strand, within Dsui_2864at 3056.047 kb on + strandat 3056.055 kb on + strand, within Dsui_2864at 3056.055 kb on + strandat 3056.187 kb on - strand, within Dsui_2864at 3056.276 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor
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3,053,926 + +0.8
3,055,625 + -0.3
3,055,655 - -0.8
3,055,876 + +0.8
3,056,037 - Dsui_2864 0.16 +0.7
3,056,047 + +1.8
3,056,055 + Dsui_2864 0.16 -1.3
3,056,055 + +0.2
3,056,187 - Dsui_2864 0.21 -1.0
3,056,276 + +1.8

Or see this region's nucleotide sequence