Strain Fitness in Dechlorosoma suillum PS around Dsui_2537

Experiment: Anaero. lactate (C), chlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2535 and Dsui_2536 overlap by 66 nucleotidesDsui_2536 and Dsui_2537 are separated by 205 nucleotidesDsui_2537 and Dsui_2538 are separated by 108 nucleotides Dsui_2535: Dsui_2535 - putative divalent heavy-metal cations transporter, at 2,687,001 to 2,687,774 _2535 Dsui_2536: Dsui_2536 - hypothetical protein, at 2,687,709 to 2,688,020 _2536 Dsui_2537: Dsui_2537 - poly(R)-hydroxyalkanoic acid synthase, class I, at 2,688,226 to 2,689,965 _2537 Dsui_2538: Dsui_2538 - acetoacetyl-CoA reductase, at 2,690,074 to 2,690,814 _2538 Position (kb) 2688 2689 2690Strain fitness (log2 ratio) -1 0 1 2at 2687.386 kb on - strand, within Dsui_2535at 2687.518 kb on - strandat 2687.569 kb on + strand, within Dsui_2535at 2687.689 kb on + strand, within Dsui_2535at 2687.695 kb on + strand, within Dsui_2535at 2687.768 kb on + strandat 2687.776 kb on - strand, within Dsui_2536at 2687.860 kb on - strand, within Dsui_2536at 2687.860 kb on - strand, within Dsui_2536at 2687.896 kb on - strand, within Dsui_2536at 2687.929 kb on + strand, within Dsui_2536at 2688.204 kb on + strandat 2688.206 kb on + strandat 2688.214 kb on - strandat 2690.063 kb on - strandat 2690.134 kb on + strandat 2690.139 kb on + strandat 2690.281 kb on + strand, within Dsui_2538at 2690.288 kb on - strand, within Dsui_2538at 2690.288 kb on - strandat 2690.373 kb on + strand, within Dsui_2538at 2690.380 kb on + strand, within Dsui_2538at 2690.388 kb on - strand, within Dsui_2538at 2690.388 kb on - strand, within Dsui_2538at 2690.397 kb on + strand, within Dsui_2538at 2690.508 kb on + strand, within Dsui_2538at 2690.576 kb on - strandat 2690.640 kb on + strand, within Dsui_2538at 2690.667 kb on + strand, within Dsui_2538at 2690.675 kb on - strand, within Dsui_2538at 2690.711 kb on + strand, within Dsui_2538at 2690.737 kb on + strand, within Dsui_2538at 2690.742 kb on - strandat 2690.747 kb on + strandat 2690.747 kb on + strandat 2690.811 kb on - strandat 2690.821 kb on + strandat 2690.964 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor
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2,687,386 - Dsui_2535 0.50 +0.3
2,687,518 - -0.6
2,687,569 + Dsui_2535 0.73 -0.6
2,687,689 + Dsui_2535 0.89 -0.3
2,687,695 + Dsui_2535 0.90 -0.1
2,687,768 + +0.2
2,687,776 - Dsui_2536 0.21 +0.3
2,687,860 - Dsui_2536 0.48 -0.0
2,687,860 - Dsui_2536 0.48 +1.2
2,687,896 - Dsui_2536 0.60 +0.4
2,687,929 + Dsui_2536 0.71 +0.1
2,688,204 + -0.6
2,688,206 + +0.2
2,688,214 - -0.8
2,690,063 - +0.8
2,690,134 + +0.7
2,690,139 + +1.9
2,690,281 + Dsui_2538 0.28 +1.2
2,690,288 - Dsui_2538 0.29 +0.2
2,690,288 - -0.0
2,690,373 + Dsui_2538 0.40 +1.6
2,690,380 + Dsui_2538 0.41 +1.5
2,690,388 - Dsui_2538 0.42 +1.5
2,690,388 - Dsui_2538 0.42 +1.1
2,690,397 + Dsui_2538 0.44 +1.7
2,690,508 + Dsui_2538 0.59 +1.4
2,690,576 - +0.7
2,690,640 + Dsui_2538 0.76 +1.3
2,690,667 + Dsui_2538 0.80 +1.4
2,690,675 - Dsui_2538 0.81 +2.0
2,690,711 + Dsui_2538 0.86 +1.3
2,690,737 + Dsui_2538 0.89 +1.2
2,690,742 - -1.3
2,690,747 + +1.1
2,690,747 + +1.5
2,690,811 - +2.1
2,690,821 + +0.7
2,690,964 + +0.7

Or see this region's nucleotide sequence