Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1339 and Dsui_1340 are separated by 101 nucleotides Dsui_1340 and Dsui_1341 are separated by 24 nucleotides Dsui_1341 and Dsui_1342 are separated by 44 nucleotides
Dsui_1339: Dsui_1339 - 23S ribosomal RNA, at 1,395,608 to 1,398,489
_1339
Dsui_1340: Dsui_1340 - 5S ribosomal RNA, at 1,398,591 to 1,398,704
_1340
Dsui_1341: Dsui_1341 - methionine-S-sulfoxide reductase, at 1,398,729 to 1,399,430
_1341
Dsui_1342: Dsui_1342 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,399,475 to 1,399,819
_1342
Position (kb)
1398
1399 Strain fitness (log2 ratio)
-1
0
1 at 1398.805 kb on + strand, within Dsui_1341 at 1398.805 kb on + strand, within Dsui_1341 at 1398.805 kb on + strand, within Dsui_1341 at 1398.805 kb on + strand, within Dsui_1341 at 1398.818 kb on + strand, within Dsui_1341 at 1398.849 kb on + strand, within Dsui_1341 at 1398.870 kb on - strand, within Dsui_1341 at 1398.885 kb on + strand, within Dsui_1341 at 1398.903 kb on - strand, within Dsui_1341 at 1398.918 kb on - strand, within Dsui_1341 at 1398.960 kb on + strand, within Dsui_1341 at 1399.000 kb on - strand, within Dsui_1341 at 1399.010 kb on - strand, within Dsui_1341 at 1399.055 kb on + strand, within Dsui_1341 at 1399.055 kb on + strand, within Dsui_1341 at 1399.055 kb on + strand, within Dsui_1341 at 1399.063 kb on - strand, within Dsui_1341 at 1399.069 kb on - strand, within Dsui_1341 at 1399.129 kb on + strand, within Dsui_1341 at 1399.129 kb on + strand, within Dsui_1341 at 1399.136 kb on + strand, within Dsui_1341 at 1399.136 kb on + strand, within Dsui_1341 at 1399.137 kb on - strand, within Dsui_1341 at 1399.144 kb on - strand, within Dsui_1341 at 1399.158 kb on + strand, within Dsui_1341 at 1399.166 kb on - strand, within Dsui_1341 at 1399.181 kb on - strand, within Dsui_1341 at 1399.188 kb on + strand, within Dsui_1341 at 1399.188 kb on + strand, within Dsui_1341 at 1399.188 kb on + strand, within Dsui_1341 at 1399.227 kb on + strand, within Dsui_1341 at 1399.240 kb on - strand, within Dsui_1341 at 1399.244 kb on + strand, within Dsui_1341 at 1399.301 kb on + strand, within Dsui_1341 at 1399.307 kb on + strand, within Dsui_1341 at 1399.347 kb on + strand, within Dsui_1341 at 1399.354 kb on + strand, within Dsui_1341 at 1399.365 kb on - strand at 1399.390 kb on + strand at 1399.415 kb on + strand at 1399.477 kb on - strand at 1399.482 kb on - strand at 1399.487 kb on - strand at 1399.499 kb on + strand at 1399.502 kb on - strand at 1399.507 kb on - strand at 1399.514 kb on + strand, within Dsui_1342 at 1399.563 kb on - strand, within Dsui_1342 at 1399.582 kb on + strand, within Dsui_1342 at 1399.680 kb on - strand, within Dsui_1342
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,398,805 + Dsui_1341 0.11 -0.8 1,398,805 + Dsui_1341 0.11 -0.0 1,398,805 + Dsui_1341 0.11 +0.0 1,398,805 + Dsui_1341 0.11 -0.1 1,398,818 + Dsui_1341 0.13 +0.2 1,398,849 + Dsui_1341 0.17 -0.4 1,398,870 - Dsui_1341 0.20 +0.1 1,398,885 + Dsui_1341 0.22 -0.1 1,398,903 - Dsui_1341 0.25 -0.1 1,398,918 - Dsui_1341 0.27 -0.1 1,398,960 + Dsui_1341 0.33 -0.6 1,399,000 - Dsui_1341 0.39 -0.0 1,399,010 - Dsui_1341 0.40 +0.2 1,399,055 + Dsui_1341 0.46 +0.1 1,399,055 + Dsui_1341 0.46 -0.4 1,399,055 + Dsui_1341 0.46 +0.7 1,399,063 - Dsui_1341 0.48 +0.2 1,399,069 - Dsui_1341 0.48 -0.0 1,399,129 + Dsui_1341 0.57 +0.4 1,399,129 + Dsui_1341 0.57 +0.4 1,399,136 + Dsui_1341 0.58 +0.5 1,399,136 + Dsui_1341 0.58 +0.3 1,399,137 - Dsui_1341 0.58 -0.0 1,399,144 - Dsui_1341 0.59 -0.0 1,399,158 + Dsui_1341 0.61 -0.2 1,399,166 - Dsui_1341 0.62 +0.1 1,399,181 - Dsui_1341 0.64 +0.5 1,399,188 + Dsui_1341 0.65 -0.2 1,399,188 + Dsui_1341 0.65 +0.4 1,399,188 + Dsui_1341 0.65 +0.2 1,399,227 + Dsui_1341 0.71 +0.2 1,399,240 - Dsui_1341 0.73 +0.1 1,399,244 + Dsui_1341 0.73 +0.1 1,399,301 + Dsui_1341 0.81 -0.2 1,399,307 + Dsui_1341 0.82 +0.3 1,399,347 + Dsui_1341 0.88 +0.2 1,399,354 + Dsui_1341 0.89 +0.1 1,399,365 - -0.4 1,399,390 + +0.4 1,399,415 + +0.0 1,399,477 - +0.2 1,399,482 - +0.8 1,399,487 - +0.0 1,399,499 + +0.2 1,399,502 - +0.2 1,399,507 - +0.1 1,399,514 + Dsui_1342 0.11 +0.1 1,399,563 - Dsui_1342 0.26 +0.0 1,399,582 + Dsui_1342 0.31 +0.2 1,399,680 - Dsui_1342 0.59 +0.3
Or see this region's nucleotide sequence