Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1196 and Dsui_1197 are separated by 60 nucleotides Dsui_1197 and Dsui_1198 are separated by 1 nucleotides Dsui_1198 and Dsui_1199 are separated by 51 nucleotides Dsui_1199 and Dsui_1200 are separated by 2 nucleotides
Dsui_1196: Dsui_1196 - metalloprotein, YbeY/UPF0054 family, at 1,248,511 to 1,248,969
_1196
Dsui_1197: Dsui_1197 - putative Mg2+ and Co2+ transporter CorC, at 1,249,030 to 1,249,875
_1197
Dsui_1198: Dsui_1198 - apolipoprotein N-acyltransferase, at 1,249,877 to 1,251,394
_1198
Dsui_1199: Dsui_1199 - glycyl-tRNA synthetase, tetrameric type, alpha subunit, at 1,251,446 to 1,252,375
_1199
Dsui_1200: Dsui_1200 - glycyl-tRNA synthetase, tetrameric type, beta subunit, at 1,252,378 to 1,254,621
_1200
Position (kb)
1249
1250
1251
1252 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1249.028 kb on - strand at 1249.058 kb on - strand at 1249.073 kb on - strand at 1249.082 kb on + strand at 1249.094 kb on - strand at 1249.196 kb on - strand, within Dsui_1197 at 1249.286 kb on - strand, within Dsui_1197 at 1249.369 kb on + strand, within Dsui_1197 at 1249.377 kb on - strand, within Dsui_1197 at 1249.394 kb on - strand, within Dsui_1197 at 1249.585 kb on + strand, within Dsui_1197 at 1249.621 kb on - strand, within Dsui_1197 at 1249.637 kb on - strand, within Dsui_1197 at 1249.644 kb on + strand, within Dsui_1197 at 1249.801 kb on + strand at 1249.827 kb on + strand at 1249.847 kb on + strand at 1249.924 kb on - strand at 1250.079 kb on + strand, within Dsui_1198 at 1250.081 kb on - strand at 1250.169 kb on + strand, within Dsui_1198 at 1250.177 kb on - strand at 1250.177 kb on - strand at 1250.283 kb on + strand, within Dsui_1198 at 1250.559 kb on + strand, within Dsui_1198 at 1250.559 kb on + strand, within Dsui_1198 at 1250.645 kb on - strand at 1250.650 kb on - strand at 1250.656 kb on - strand at 1250.850 kb on + strand, within Dsui_1198 at 1250.868 kb on - strand at 1250.936 kb on - strand at 1250.954 kb on - strand at 1251.079 kb on + strand, within Dsui_1198 at 1251.088 kb on + strand, within Dsui_1198 at 1251.179 kb on - strand at 1251.229 kb on + strand, within Dsui_1198 at 1251.229 kb on + strand, within Dsui_1198 at 1251.237 kb on - strand, within Dsui_1198 at 1251.277 kb on + strand at 1251.345 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,249,028 - +0.2 1,249,058 - +0.6 1,249,073 - +1.6 1,249,082 + +1.3 1,249,094 - +0.9 1,249,196 - Dsui_1197 0.20 -0.0 1,249,286 - Dsui_1197 0.30 -0.1 1,249,369 + Dsui_1197 0.40 +1.1 1,249,377 - Dsui_1197 0.41 +1.4 1,249,394 - Dsui_1197 0.43 -1.2 1,249,585 + Dsui_1197 0.66 +0.3 1,249,621 - Dsui_1197 0.70 +0.8 1,249,637 - Dsui_1197 0.72 -2.2 1,249,644 + Dsui_1197 0.73 -0.4 1,249,801 + +0.5 1,249,827 + +0.7 1,249,847 + -1.0 1,249,924 - -0.6 1,250,079 + Dsui_1198 0.13 +0.2 1,250,081 - -0.2 1,250,169 + Dsui_1198 0.19 +0.2 1,250,177 - +1.8 1,250,177 - +0.2 1,250,283 + Dsui_1198 0.27 -1.4 1,250,559 + Dsui_1198 0.45 -1.2 1,250,559 + Dsui_1198 0.45 -0.5 1,250,645 - +1.8 1,250,650 - +0.8 1,250,656 - +0.8 1,250,850 + Dsui_1198 0.64 -1.0 1,250,868 - +0.5 1,250,936 - +0.2 1,250,954 - +1.8 1,251,079 + Dsui_1198 0.79 -1.3 1,251,088 + Dsui_1198 0.80 -1.6 1,251,179 - -0.2 1,251,229 + Dsui_1198 0.89 -0.3 1,251,229 + Dsui_1198 0.89 -2.1 1,251,237 - Dsui_1198 0.90 +0.2 1,251,277 + +0.2 1,251,345 + -0.1
Or see this region's nucleotide sequence