Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1115 and Dsui_1116 are separated by 131 nucleotides Dsui_1116 and Dsui_1117 are separated by 78 nucleotides Dsui_1117 and Dsui_1118 are separated by 123 nucleotides
Dsui_1115: Dsui_1115 - putative acyl-CoA transferase/carnitine dehydratase, at 1,162,526 to 1,163,692
_1115
Dsui_1116: Dsui_1116 - methyl-accepting chemotaxis protein, at 1,163,824 to 1,165,431
_1116
Dsui_1117: Dsui_1117 - hemerythrin-like metal-binding domain-containing protein, at 1,165,510 to 1,165,926
_1117
Dsui_1118: Dsui_1118 - putative permease, at 1,166,050 to 1,166,946
_1118
Position (kb)
1163
1164
1165
1166 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1163.152 kb on - strand, within Dsui_1115 at 1163.365 kb on + strand, within Dsui_1115 at 1163.365 kb on + strand, within Dsui_1115 at 1163.392 kb on + strand, within Dsui_1115 at 1163.424 kb on - strand, within Dsui_1115 at 1163.427 kb on - strand, within Dsui_1115 at 1163.473 kb on - strand, within Dsui_1115 at 1163.476 kb on + strand, within Dsui_1115 at 1163.491 kb on - strand, within Dsui_1115 at 1163.540 kb on + strand, within Dsui_1115 at 1163.540 kb on + strand, within Dsui_1115 at 1163.551 kb on - strand, within Dsui_1115 at 1163.618 kb on + strand at 1163.676 kb on + strand at 1163.694 kb on - strand at 1163.711 kb on + strand at 1163.758 kb on - strand at 1163.782 kb on + strand at 1163.782 kb on + strand at 1163.840 kb on - strand at 1163.877 kb on + strand at 1163.928 kb on + strand at 1163.973 kb on + strand at 1164.016 kb on - strand, within Dsui_1116 at 1164.028 kb on - strand, within Dsui_1116 at 1164.032 kb on + strand, within Dsui_1116 at 1164.048 kb on - strand, within Dsui_1116 at 1164.093 kb on - strand, within Dsui_1116 at 1164.098 kb on - strand, within Dsui_1116 at 1164.098 kb on - strand, within Dsui_1116 at 1164.098 kb on - strand, within Dsui_1116 at 1164.171 kb on - strand, within Dsui_1116 at 1164.179 kb on + strand, within Dsui_1116 at 1164.442 kb on + strand, within Dsui_1116 at 1164.477 kb on + strand, within Dsui_1116 at 1164.546 kb on + strand, within Dsui_1116 at 1164.624 kb on + strand, within Dsui_1116 at 1164.632 kb on - strand, within Dsui_1116 at 1164.658 kb on + strand, within Dsui_1116 at 1164.785 kb on - strand, within Dsui_1116 at 1165.137 kb on + strand, within Dsui_1116 at 1165.188 kb on + strand, within Dsui_1116 at 1165.275 kb on + strand at 1165.709 kb on + strand, within Dsui_1117 at 1165.736 kb on + strand at 1165.817 kb on - strand, within Dsui_1117 at 1165.817 kb on - strand, within Dsui_1117 at 1165.969 kb on - strand at 1166.010 kb on + strand at 1166.018 kb on - strand at 1166.062 kb on + strand at 1166.183 kb on - strand, within Dsui_1118 at 1166.193 kb on - strand, within Dsui_1118 at 1166.212 kb on + strand, within Dsui_1118 at 1166.261 kb on + strand, within Dsui_1118 at 1166.278 kb on + strand, within Dsui_1118 at 1166.286 kb on - strand, within Dsui_1118 at 1166.345 kb on - strand, within Dsui_1118
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,163,152 - Dsui_1115 0.54 -0.6 1,163,365 + Dsui_1115 0.72 -0.8 1,163,365 + Dsui_1115 0.72 -1.8 1,163,392 + Dsui_1115 0.74 +0.6 1,163,424 - Dsui_1115 0.77 -0.2 1,163,427 - Dsui_1115 0.77 -0.7 1,163,473 - Dsui_1115 0.81 -0.1 1,163,476 + Dsui_1115 0.81 -0.3 1,163,491 - Dsui_1115 0.83 -0.9 1,163,540 + Dsui_1115 0.87 -0.1 1,163,540 + Dsui_1115 0.87 -0.6 1,163,551 - Dsui_1115 0.88 -1.2 1,163,618 + -0.7 1,163,676 + -0.5 1,163,694 - -1.0 1,163,711 + +0.5 1,163,758 - -0.8 1,163,782 + -0.6 1,163,782 + -0.5 1,163,840 - -0.0 1,163,877 + +0.7 1,163,928 + -0.1 1,163,973 + -1.3 1,164,016 - Dsui_1116 0.12 -0.2 1,164,028 - Dsui_1116 0.13 -1.5 1,164,032 + Dsui_1116 0.13 -0.2 1,164,048 - Dsui_1116 0.14 -1.6 1,164,093 - Dsui_1116 0.17 -1.2 1,164,098 - Dsui_1116 0.17 -2.6 1,164,098 - Dsui_1116 0.17 -0.8 1,164,098 - Dsui_1116 0.17 +0.2 1,164,171 - Dsui_1116 0.22 -0.4 1,164,179 + Dsui_1116 0.22 -0.1 1,164,442 + Dsui_1116 0.38 -0.1 1,164,477 + Dsui_1116 0.41 -0.5 1,164,546 + Dsui_1116 0.45 -0.6 1,164,624 + Dsui_1116 0.50 -0.0 1,164,632 - Dsui_1116 0.50 -0.7 1,164,658 + Dsui_1116 0.52 -0.0 1,164,785 - Dsui_1116 0.60 -0.7 1,165,137 + Dsui_1116 0.82 -0.1 1,165,188 + Dsui_1116 0.85 -0.3 1,165,275 + +0.4 1,165,709 + Dsui_1117 0.48 -0.4 1,165,736 + -0.5 1,165,817 - Dsui_1117 0.74 -0.4 1,165,817 - Dsui_1117 0.74 -0.4 1,165,969 - -0.5 1,166,010 + -1.4 1,166,018 - -1.0 1,166,062 + -1.2 1,166,183 - Dsui_1118 0.15 -0.1 1,166,193 - Dsui_1118 0.16 +0.2 1,166,212 + Dsui_1118 0.18 -3.6 1,166,261 + Dsui_1118 0.24 -1.3 1,166,278 + Dsui_1118 0.25 -0.3 1,166,286 - Dsui_1118 0.26 -0.8 1,166,345 - Dsui_1118 0.33 -0.7
Or see this region's nucleotide sequence