Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0126 and Dsui_0127 are separated by 160 nucleotides Dsui_0127 and Dsui_0128 are separated by 81 nucleotides
Dsui_0126: Dsui_0126 - (4Fe-4S) cluster-containing protein, at 123,453 to 124,892
_0126
Dsui_0127: Dsui_0127 - transcriptional regulator, at 125,053 to 125,886
_0127
Dsui_0128: Dsui_0128 - D-alanyl-D-alanine carboxypeptidase, at 125,968 to 126,987
_0128
Position (kb)
125
126 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 124.092 kb on + strand, within Dsui_0126 at 124.111 kb on + strand at 124.127 kb on + strand, within Dsui_0126 at 124.220 kb on - strand, within Dsui_0126 at 124.276 kb on + strand, within Dsui_0126 at 124.286 kb on - strand at 124.322 kb on - strand, within Dsui_0126 at 124.332 kb on + strand at 124.348 kb on - strand, within Dsui_0126 at 124.396 kb on - strand, within Dsui_0126 at 124.396 kb on - strand, within Dsui_0126 at 124.533 kb on - strand, within Dsui_0126 at 124.543 kb on - strand, within Dsui_0126 at 124.567 kb on - strand, within Dsui_0126 at 124.740 kb on - strand, within Dsui_0126 at 124.759 kb on - strand at 124.781 kb on + strand at 124.785 kb on - strand at 124.828 kb on - strand at 124.848 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.900 kb on + strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.908 kb on - strand at 124.910 kb on + strand at 125.014 kb on - strand at 125.072 kb on + strand at 125.080 kb on - strand at 125.135 kb on + strand at 125.204 kb on + strand, within Dsui_0127 at 125.204 kb on + strand, within Dsui_0127 at 125.204 kb on + strand, within Dsui_0127 at 125.212 kb on - strand, within Dsui_0127 at 125.217 kb on + strand, within Dsui_0127 at 125.217 kb on + strand, within Dsui_0127 at 125.240 kb on - strand, within Dsui_0127 at 125.266 kb on + strand, within Dsui_0127 at 125.309 kb on + strand, within Dsui_0127 at 125.383 kb on - strand, within Dsui_0127 at 125.388 kb on - strand, within Dsui_0127 at 125.399 kb on - strand, within Dsui_0127 at 125.411 kb on + strand, within Dsui_0127 at 125.429 kb on + strand, within Dsui_0127 at 125.482 kb on - strand, within Dsui_0127 at 125.514 kb on + strand, within Dsui_0127 at 125.536 kb on - strand, within Dsui_0127 at 125.541 kb on - strand, within Dsui_0127 at 125.556 kb on + strand, within Dsui_0127 at 125.556 kb on + strand, within Dsui_0127 at 125.564 kb on - strand, within Dsui_0127 at 125.816 kb on + strand at 125.837 kb on + strand at 125.857 kb on + strand at 125.857 kb on + strand at 125.858 kb on - strand at 125.862 kb on + strand at 125.875 kb on - strand at 126.085 kb on - strand, within Dsui_0128 at 126.143 kb on + strand at 126.151 kb on - strand, within Dsui_0128 at 126.151 kb on - strand, within Dsui_0128 at 126.151 kb on - strand, within Dsui_0128 at 126.173 kb on + strand, within Dsui_0128 at 126.221 kb on + strand, within Dsui_0128 at 126.233 kb on + strand, within Dsui_0128 at 126.271 kb on + strand at 126.279 kb on - strand, within Dsui_0128 at 126.284 kb on + strand, within Dsui_0128 at 126.298 kb on - strand, within Dsui_0128 at 126.406 kb on + strand, within Dsui_0128 at 126.438 kb on + strand, within Dsui_0128 at 126.439 kb on + strand, within Dsui_0128 at 126.466 kb on + strand, within Dsui_0128 at 126.534 kb on + strand, within Dsui_0128 at 126.534 kb on + strand, within Dsui_0128 at 126.541 kb on - strand, within Dsui_0128 at 126.603 kb on + strand at 126.603 kb on + strand at 126.656 kb on - strand, within Dsui_0128 at 126.680 kb on + strand, within Dsui_0128 at 126.688 kb on - strand, within Dsui_0128 at 126.688 kb on - strand, within Dsui_0128 at 126.704 kb on - strand, within Dsui_0128 at 126.715 kb on - strand, within Dsui_0128 at 126.720 kb on - strand, within Dsui_0128 at 126.727 kb on + strand, within Dsui_0128 at 126.774 kb on + strand, within Dsui_0128 at 126.782 kb on - strand, within Dsui_0128 at 126.782 kb on - strand, within Dsui_0128 at 126.842 kb on + strand, within Dsui_0128 at 126.850 kb on - strand, within Dsui_0128
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 124,092 + Dsui_0126 0.44 -0.7 124,111 + +0.7 124,127 + Dsui_0126 0.47 +1.1 124,220 - Dsui_0126 0.53 +0.1 124,276 + Dsui_0126 0.57 -0.0 124,286 - +2.0 124,322 - Dsui_0126 0.60 -0.3 124,332 + +1.0 124,348 - Dsui_0126 0.62 -0.1 124,396 - Dsui_0126 0.65 -0.1 124,396 - Dsui_0126 0.65 +0.8 124,533 - Dsui_0126 0.75 -0.3 124,543 - Dsui_0126 0.76 -0.1 124,567 - Dsui_0126 0.77 +0.9 124,740 - Dsui_0126 0.89 +0.5 124,759 - -0.2 124,781 + +0.7 124,785 - +1.2 124,828 - +0.4 124,848 + +1.0 124,900 + -0.7 124,900 + +1.0 124,900 + -0.3 124,900 + +2.0 124,900 + +1.6 124,900 + +1.0 124,900 + +0.8 124,908 - -0.2 124,908 - +0.3 124,908 - -0.2 124,908 - +0.2 124,908 - -0.3 124,908 - -0.7 124,908 - -0.3 124,908 - -0.0 124,908 - -0.1 124,910 + +2.0 125,014 - +0.7 125,072 + -0.6 125,080 - +2.0 125,135 + -1.1 125,204 + Dsui_0127 0.18 -0.4 125,204 + Dsui_0127 0.18 -0.1 125,204 + Dsui_0127 0.18 +0.4 125,212 - Dsui_0127 0.19 -0.7 125,217 + Dsui_0127 0.20 -0.4 125,217 + Dsui_0127 0.20 -0.2 125,240 - Dsui_0127 0.22 -2.2 125,266 + Dsui_0127 0.26 -1.0 125,309 + Dsui_0127 0.31 -0.9 125,383 - Dsui_0127 0.40 -0.8 125,388 - Dsui_0127 0.40 -1.9 125,399 - Dsui_0127 0.41 +0.2 125,411 + Dsui_0127 0.43 +0.3 125,429 + Dsui_0127 0.45 -0.0 125,482 - Dsui_0127 0.51 -0.4 125,514 + Dsui_0127 0.55 -0.4 125,536 - Dsui_0127 0.58 +1.2 125,541 - Dsui_0127 0.59 -0.7 125,556 + Dsui_0127 0.60 -0.8 125,556 + Dsui_0127 0.60 -0.0 125,564 - Dsui_0127 0.61 -0.5 125,816 + -0.6 125,837 + -0.5 125,857 + -0.1 125,857 + +0.2 125,858 - -0.7 125,862 + +0.3 125,875 - -0.3 126,085 - Dsui_0128 0.11 +0.7 126,143 + +0.7 126,151 - Dsui_0128 0.18 +1.2 126,151 - Dsui_0128 0.18 +0.6 126,151 - Dsui_0128 0.18 +0.7 126,173 + Dsui_0128 0.20 +0.1 126,221 + Dsui_0128 0.25 +1.2 126,233 + Dsui_0128 0.26 +1.4 126,271 + +1.0 126,279 - Dsui_0128 0.30 -0.5 126,284 + Dsui_0128 0.31 +0.8 126,298 - Dsui_0128 0.32 +0.1 126,406 + Dsui_0128 0.43 -0.2 126,438 + Dsui_0128 0.46 +0.6 126,439 + Dsui_0128 0.46 +0.5 126,466 + Dsui_0128 0.49 +1.3 126,534 + Dsui_0128 0.55 -0.3 126,534 + Dsui_0128 0.55 +0.1 126,541 - Dsui_0128 0.56 +0.6 126,603 + +1.0 126,603 + +0.4 126,656 - Dsui_0128 0.67 +0.6 126,680 + Dsui_0128 0.70 +0.2 126,688 - Dsui_0128 0.71 +1.1 126,688 - Dsui_0128 0.71 +0.7 126,704 - Dsui_0128 0.72 +0.1 126,715 - Dsui_0128 0.73 +0.9 126,720 - Dsui_0128 0.74 +0.3 126,727 + Dsui_0128 0.74 +2.0 126,774 + Dsui_0128 0.79 -0.2 126,782 - Dsui_0128 0.80 +0.2 126,782 - Dsui_0128 0.80 +0.7 126,842 + Dsui_0128 0.86 +0.4 126,850 - Dsui_0128 0.86 +0.7
Or see this region's nucleotide sequence