Strain Fitness in Shewanella amazonensis SB2B around Sama_2483

Experiment: Uridine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine
2,983,021	+		Sama_2481	0.41	-0.8
2,983,028	+		Sama_2481	0.43	-0.2
2,983,029	-		Sama_2481	0.43	+0.3
2,983,029	-		Sama_2481	0.43	+0.6
2,983,158	+		Sama_2481	0.72	+0.6
2,983,158	+		Sama_2481	0.72	+0.2
2,983,158	+		Sama_2481	0.72	+0.9
2,983,159	-		Sama_2481	0.73	-1.2
2,983,159	-		Sama_2481	0.73	+1.0
2,983,159	-		Sama_2481	0.73	+0.8
2,983,162	-		Sama_2481	0.73	+0.1
2,983,162	-		Sama_2481	0.73	-0.2
2,983,162	-		Sama_2481	0.73	-0.2
2,983,162	-		Sama_2481	0.73	-0.4
2,983,162	-		Sama_2481	0.73	-0.7
2,983,217	-		Sama_2481	0.86	-0.1
2,983,347	+				+0.8
2,983,435	+				+0.6
2,983,436	-				-2.4
2,983,478	+		Sama_2482	0.12	-0.6
2,983,479	-		Sama_2482	0.12	-0.4
2,983,492	-		Sama_2482	0.14	+0.4
2,983,540	+		Sama_2482	0.22	+0.3
2,983,564	+		Sama_2482	0.26	+0.0
2,983,565	-		Sama_2482	0.26	+0.1
2,983,585	+		Sama_2482	0.29	-1.2
2,983,585	+		Sama_2482	0.29	-1.7
2,983,586	-		Sama_2482	0.30	+0.2
2,983,629	+		Sama_2482	0.37	-0.3
2,983,630	-		Sama_2482	0.37	-1.4
2,983,654	+		Sama_2482	0.41	-0.6
2,983,655	-		Sama_2482	0.41	-1.4
2,983,655	-		Sama_2482	0.41	+0.1
2,983,658	+		Sama_2482	0.42	-0.6
2,983,658	+		Sama_2482	0.42	-0.6
2,983,658	+		Sama_2482	0.42	-0.0
2,983,693	+		Sama_2482	0.48	-0.0
2,983,693	+		Sama_2482	0.48	+0.1
2,983,694	-		Sama_2482	0.48	-0.4
2,983,694	-		Sama_2482	0.48	-0.0
2,983,764	+		Sama_2482	0.59	-0.4
2,983,765	-		Sama_2482	0.60	+0.3
2,983,765	-		Sama_2482	0.60	-2.0
2,983,772	+		Sama_2482	0.61	-0.2
2,983,772	+		Sama_2482	0.61	-0.3
2,983,772	+		Sama_2482	0.61	-0.6
2,983,773	-		Sama_2482	0.61	+0.2
2,983,773	-		Sama_2482	0.61	+0.4
2,983,773	-		Sama_2482	0.61	-0.1
2,983,773	-		Sama_2482	0.61	+0.4
2,983,773	-		Sama_2482	0.61	-0.8
2,983,773	-		Sama_2482	0.61	+2.2
2,983,773	-		Sama_2482	0.61	-0.6
2,983,774	+		Sama_2482	0.61	+0.4
2,983,774	+		Sama_2482	0.61	+0.3
2,983,774	+		Sama_2482	0.61	+0.2
2,983,774	+		Sama_2482	0.61	+0.1
2,983,774	+		Sama_2482	0.61	+0.7
2,983,775	-		Sama_2482	0.61	+2.2
2,983,775	-		Sama_2482	0.61	+0.5
2,983,804	+		Sama_2482	0.66	-0.1
2,983,804	+		Sama_2482	0.66	+1.0
2,983,804	+		Sama_2482	0.66	-0.2
2,983,804	+		Sama_2482	0.66	+0.6
2,984,045	+				+0.8
2,984,046	-				+0.3
2,984,046	-				-0.9
2,984,046	-				-0.6
2,984,092	+				-0.4
2,984,092	+				+1.4
2,984,093	-				+0.3
2,984,175	-		Sama_2483	0.14	-1.4
2,984,188	+		Sama_2483	0.15	-0.0
2,984,188	+		Sama_2483	0.15	-0.5
2,984,188	+		Sama_2483	0.15	-1.5
2,984,189	-		Sama_2483	0.15	-0.1
2,984,189	-		Sama_2483	0.15	+0.3
2,984,195	+		Sama_2483	0.16	-0.3
2,984,196	-		Sama_2483	0.16	+0.6
2,984,266	+		Sama_2483	0.22	-0.6
2,984,266	+		Sama_2483	0.22	+0.5
2,984,267	-		Sama_2483	0.22	-1.0
2,984,267	-		Sama_2483	0.22	+1.6
2,984,267	-		Sama_2483	0.22	+0.6
2,984,269	+		Sama_2483	0.22	+1.6
2,984,270	-		Sama_2483	0.22	+0.8
2,984,298	+		Sama_2483	0.25	-0.6
2,984,298	+		Sama_2483	0.25	-0.0
2,984,299	-		Sama_2483	0.25	+0.3
2,984,299	-		Sama_2483	0.25	-0.0
2,984,391	+		Sama_2483	0.33	-0.6
2,984,417	-		Sama_2483	0.35	+0.4
2,984,556	+		Sama_2483	0.47	+1.3
2,984,556	+		Sama_2483	0.47	-1.0
2,984,556	+		Sama_2483	0.47	-0.1
2,984,557	-		Sama_2483	0.48	+0.7
2,984,557	-		Sama_2483	0.48	+1.6
2,984,557	-		Sama_2483	0.48	+0.0
2,984,575	-		Sama_2483	0.49	-1.7
2,984,597	+		Sama_2483	0.51	+0.8
2,984,598	-		Sama_2483	0.51	+0.1
2,984,620	+		Sama_2483	0.53	+0.6
2,984,620	+		Sama_2483	0.53	+0.4
2,984,621	-		Sama_2483	0.53	+0.2
2,984,675	-		Sama_2483	0.58	-1.2
2,984,675	-		Sama_2483	0.58	-2.4
2,984,678	+		Sama_2483	0.58	+0.0
2,984,678	+		Sama_2483	0.58	-0.0
2,984,679	-		Sama_2483	0.58	+1.4
2,984,679	-		Sama_2483	0.58	-0.0
2,984,679	-		Sama_2483	0.58	-0.3
2,984,679	-		Sama_2483	0.58	+0.3
2,984,679	-		Sama_2483	0.58	-1.2
2,984,723	+		Sama_2483	0.62	+0.1
2,984,723	+		Sama_2483	0.62	+0.1
2,984,723	+		Sama_2483	0.62	-1.0
2,984,724	-		Sama_2483	0.62	-0.5
2,984,724	-		Sama_2483	0.62	-0.3
2,984,724	-		Sama_2483	0.62	+0.8
2,984,738	+		Sama_2483	0.63	-1.2
2,984,767	+		Sama_2483	0.66	-0.9
2,984,768	-		Sama_2483	0.66	+0.6
2,984,777	+		Sama_2483	0.67	+0.6
2,984,778	-		Sama_2483	0.67	+0.3
2,984,796	-		Sama_2483	0.69	-0.0
2,984,855	-		Sama_2483	0.74	+1.2
2,984,872	-		Sama_2483	0.75	-1.0
2,984,906	+		Sama_2483	0.78	-0.3
2,984,907	-		Sama_2483	0.78	-0.3
2,985,078	+				-0.6
2,985,078	+				-0.8
2,985,078	+				-0.6
2,985,135	+				+0.6
2,985,136	-				-1.4
2,985,136	-				+1.3
2,985,192	-				+0.2
2,985,193	+				+1.3
2,985,193	+				+0.6
2,985,193	+				+0.6
2,985,194	-				-0.7
2,985,194	-				-0.2
2,985,194	-				+1.8
2,985,194	-				-0.4
2,985,194	-				+1.2
2,985,225	+				+0.6
2,985,226	-				+1.7
2,985,226	-				-0.0
2,985,229	-				+1.2
2,985,234	+				-0.3
2,985,234	+				+0.2
2,985,264	-				-3.2
2,985,277	+				+1.3
2,985,305	+				+0.6
2,985,305	+				-0.2
2,985,305	+				+1.6
2,985,306	-				+0.1
2,985,306	-				+1.7
2,985,306	-				-1.0
2,985,306	-				-0.9
2,985,306	-				+0.1
2,985,306	-				+0.1
2,985,309	+				+0.9
2,985,309	+				-0.6
2,985,310	-				-1.6
2,985,310	-				-1.3
2,985,310	-				+0.1
2,985,310	-				+1.2
2,985,312	-				+0.2
2,985,479	+				+0.3
2,985,503	+		Sama_2484	0.11	-1.4
2,985,504	-		Sama_2484	0.11	-0.8
2,985,540	+		Sama_2484	0.13	+2.2
2,985,540	+		Sama_2484	0.13	-0.2
2,985,540	+		Sama_2484	0.13	-0.1
2,985,540	+		Sama_2484	0.13	-1.1
2,985,624	-		Sama_2484	0.17	+0.1
2,985,705	+		Sama_2484	0.22	-1.0
2,985,705	+		Sama_2484	0.22	+0.6
2,985,726	+		Sama_2484	0.23	-0.6
2,985,745	-		Sama_2484	0.24	-0.6
2,985,745	-		Sama_2484	0.24	+0.2
2,985,776	+		Sama_2484	0.26	+0.1
2,985,777	-		Sama_2484	0.26	+0.6
2,985,777	-		Sama_2484	0.26	-0.7
2,985,797	+		Sama_2484	0.27	-1.0
2,985,819	+		Sama_2484	0.28	+0.2
2,985,819	+		Sama_2484	0.28	-0.6
2,985,819	+		Sama_2484	0.28	+0.3
2,985,819	+		Sama_2484	0.28	-0.2
2,985,819	+		Sama_2484	0.28	-0.0
2,985,819	+		Sama_2484	0.28	+2.0
2,985,819	+		Sama_2484	0.28	-0.2
2,985,820	-		Sama_2484	0.28	+0.8
2,985,820	-		Sama_2484	0.28	-0.3
2,985,820	-		Sama_2484	0.28	-0.1
2,985,820	-		Sama_2484	0.28	-0.7
2,985,820	-		Sama_2484	0.28	+0.4
2,985,821	+		Sama_2484	0.28	+0.1
2,985,821	+		Sama_2484	0.28	+0.0
2,985,863	+		Sama_2484	0.30	+0.2
2,985,863	+		Sama_2484	0.30	-0.6
2,985,944	+		Sama_2484	0.34	+0.5
2,985,944	+		Sama_2484	0.34	-1.0
2,985,945	-		Sama_2484	0.35	-0.5
2,985,945	-		Sama_2484	0.35	-0.4
2,985,945	-		Sama_2484	0.35	-0.1
2,985,945	-		Sama_2484	0.35	+1.4
2,985,947	+		Sama_2484	0.35	-0.9
2,985,947	+		Sama_2484	0.35	+0.8
2,985,947	+		Sama_2484	0.35	-0.3
2,985,947	+		Sama_2484	0.35	+1.2
2,985,947	+		Sama_2484	0.35	+0.0
2,985,948	-		Sama_2484	0.35	-0.5
2,985,948	-		Sama_2484	0.35	+0.4
2,985,948	-		Sama_2484	0.35	-0.4
2,986,101	+		Sama_2484	0.43	-2.2
2,986,101	+		Sama_2484	0.43	-1.0
2,986,102	-		Sama_2484	0.43	+0.6
2,986,102	-		Sama_2484	0.43	-0.8
2,986,102	-		Sama_2484	0.43	-0.5