Strain Fitness in Shewanella oneidensis MR-1 around SO2597

Experiment: benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.4 mg/ml
2,729,876	+		SO2596	0.35	+0.5
2,729,914	+		SO2596	0.38	+0.3
2,729,968	+		SO2596	0.42	-0.1
2,729,968	+		SO2596	0.42	-0.5
2,729,968	+		SO2596	0.42	+0.5
2,729,978	+		SO2596	0.43	+0.5
2,730,183	-		SO2596	0.58	+0.0
2,730,215	-		SO2596	0.60	-0.7
2,730,325	+		SO2596	0.68	+0.4
2,730,358	+		SO2596	0.71	+0.6
2,730,407	+		SO2596	0.74	-0.6
2,730,431	+		SO2596	0.76	-0.4
2,730,571	-		SO2596	0.86	-0.8
2,730,580	-		SO2596	0.87	+0.1
2,730,648	-				-0.9
2,730,674	-				-0.2
2,730,948	-				+0.0
2,730,951	+				-0.3
2,730,959	-				+0.4
2,731,037	+		SO2597	0.13	+0.3
2,731,177	+		SO2597	0.20	-0.5
2,731,629	-		SO2597	0.42	-0.8
2,731,757	+		SO2597	0.48	+0.4
2,731,873	-		SO2597	0.54	+0.8
2,732,071	+		SO2597	0.64	-0.8
2,732,071	+		SO2597	0.64	+0.5
2,732,079	-		SO2597	0.64	+0.2
2,732,091	-		SO2597	0.65	-0.4
2,732,155	-		SO2597	0.68	-0.7
2,732,216	+		SO2597	0.71	+0.6
2,732,274	+		SO2597	0.74	-0.1
2,732,540	+		SO2597	0.87	+0.1
2,732,567	-		SO2597	0.88	+0.5
2,732,572	+		SO2597	0.88	-0.1
2,732,617	-				+0.3
2,732,618	-				+0.3
2,732,633	+				+0.4
2,732,654	-				+0.3
2,732,670	-				-0.3
2,732,680	-				-0.1
2,732,692	+				+0.8
2,732,692	+				-0.1
2,732,700	-				+0.4
2,732,830	-				+0.5
2,732,831	-				-0.2
2,732,947	+				-1.1
2,732,965	+				+0.1
2,733,174	+				+0.5
2,733,395	-				-0.1
2,733,395	-				-0.3
2,733,403	-				-0.7
2,733,644	-				+0.3
2,733,654	-				-0.2
2,733,662	-				-0.1
2,733,696	-				-0.0
2,733,780	-				+0.4
2,733,798	+				+0.9
2,733,801	-				+0.4
2,733,801	-				+0.4
2,733,801	-				-0.6