Experiment: m.b. Phosphomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3329 and HP15_3330 are separated by 169 nucleotides HP15_3330 and HP15_3331 are separated by 28 nucleotides HP15_3331 and HP15_3332 are separated by 258 nucleotides HP15_3332 and HP15_3333 are separated by 60 nucleotides
HP15_3329: HP15_3329 - NAD-dependent aldehyde dehydrogenase, at 3,488,828 to 3,490,273
_3329
HP15_3330: HP15_3330 - conserved hypothetical protein, at 3,490,443 to 3,491,081
_3330
HP15_3331: HP15_3331 - oxidoreductase, GMC family, at 3,491,110 to 3,492,699
_3331
HP15_3332: HP15_3332 - phosphopantetheine adenylyltransferase, at 3,492,958 to 3,493,434
_3332
HP15_3333: HP15_3333 - membrane protein YdgA-like protein, at 3,493,495 to 3,494,784
_3333
Position (kb)
3491
3492
3493 Strain fitness (log2 ratio)
-1
0
1 at 3490.158 kb on - strand at 3490.233 kb on - strand at 3490.320 kb on + strand at 3490.365 kb on - strand at 3490.438 kb on + strand at 3490.586 kb on + strand, within HP15_3330 at 3490.627 kb on + strand, within HP15_3330 at 3490.670 kb on + strand, within HP15_3330 at 3490.678 kb on - strand, within HP15_3330 at 3490.826 kb on + strand, within HP15_3330 at 3490.855 kb on - strand, within HP15_3330 at 3490.857 kb on + strand, within HP15_3330 at 3490.870 kb on - strand, within HP15_3330 at 3490.941 kb on + strand, within HP15_3330 at 3490.965 kb on - strand, within HP15_3330 at 3491.027 kb on + strand at 3491.035 kb on - strand at 3491.035 kb on - strand at 3491.035 kb on - strand at 3491.248 kb on - strand at 3491.362 kb on + strand, within HP15_3331 at 3491.370 kb on - strand, within HP15_3331 at 3491.385 kb on - strand, within HP15_3331 at 3491.440 kb on - strand, within HP15_3331 at 3491.697 kb on - strand, within HP15_3331 at 3491.704 kb on + strand, within HP15_3331 at 3491.932 kb on - strand, within HP15_3331 at 3492.142 kb on + strand, within HP15_3331 at 3492.183 kb on + strand, within HP15_3331 at 3492.214 kb on - strand, within HP15_3331 at 3492.234 kb on - strand, within HP15_3331 at 3492.239 kb on - strand, within HP15_3331 at 3492.298 kb on + strand, within HP15_3331 at 3492.303 kb on + strand, within HP15_3331 at 3492.306 kb on - strand, within HP15_3331 at 3492.311 kb on - strand, within HP15_3331 at 3492.327 kb on + strand, within HP15_3331 at 3492.346 kb on + strand, within HP15_3331 at 3492.354 kb on - strand, within HP15_3331 at 3492.531 kb on - strand, within HP15_3331 at 3492.562 kb on + strand at 3492.578 kb on - strand at 3492.615 kb on + strand at 3492.626 kb on + strand at 3492.653 kb on - strand at 3492.681 kb on + strand at 3492.693 kb on + strand at 3492.701 kb on - strand at 3493.493 kb on + strand at 3493.542 kb on - strand at 3493.591 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.5 mg/ml remove 3,490,158 - -1.5 3,490,233 - +0.3 3,490,320 + -0.2 3,490,365 - -0.5 3,490,438 + -1.0 3,490,586 + HP15_3330 0.22 +0.5 3,490,627 + HP15_3330 0.29 -0.6 3,490,670 + HP15_3330 0.36 +0.7 3,490,678 - HP15_3330 0.37 +0.7 3,490,826 + HP15_3330 0.60 -0.7 3,490,855 - HP15_3330 0.64 -1.2 3,490,857 + HP15_3330 0.65 +1.5 3,490,870 - HP15_3330 0.67 -0.3 3,490,941 + HP15_3330 0.78 +0.2 3,490,965 - HP15_3330 0.82 +0.7 3,491,027 + -0.2 3,491,035 - +0.1 3,491,035 - -0.3 3,491,035 - +0.5 3,491,248 - -0.2 3,491,362 + HP15_3331 0.16 +0.3 3,491,370 - HP15_3331 0.16 -0.5 3,491,385 - HP15_3331 0.17 -0.5 3,491,440 - HP15_3331 0.21 +0.5 3,491,697 - HP15_3331 0.37 -0.3 3,491,704 + HP15_3331 0.37 -0.3 3,491,932 - HP15_3331 0.52 +0.5 3,492,142 + HP15_3331 0.65 +0.1 3,492,183 + HP15_3331 0.67 +1.7 3,492,214 - HP15_3331 0.69 -0.0 3,492,234 - HP15_3331 0.71 +0.1 3,492,239 - HP15_3331 0.71 +1.5 3,492,298 + HP15_3331 0.75 +0.7 3,492,303 + HP15_3331 0.75 -0.2 3,492,306 - HP15_3331 0.75 -0.5 3,492,311 - HP15_3331 0.76 +0.1 3,492,327 + HP15_3331 0.77 -0.2 3,492,346 + HP15_3331 0.78 -0.0 3,492,354 - HP15_3331 0.78 +0.2 3,492,531 - HP15_3331 0.89 +0.3 3,492,562 + +0.3 3,492,578 - -1.1 3,492,615 + +1.7 3,492,626 + +0.3 3,492,653 - -0.9 3,492,681 + +0.1 3,492,693 + +0.8 3,492,701 - +0.1 3,493,493 + -1.0 3,493,542 - -0.0 3,493,591 - +1.3
Or see this region's nucleotide sequence