Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2635

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,816,549	+		Psest_2634	0.52	+1.2
2,816,549	+		Psest_2634	0.52	-0.6
2,816,549	+		Psest_2634	0.52	+0.2
2,816,786	+		Psest_2634	0.68	+1.4
2,816,850	+		Psest_2634	0.72	-0.4
2,816,916	+		Psest_2634	0.77	+2.7
2,816,916	+		Psest_2634	0.77	-0.2
2,817,231	+				+0.1
2,817,231	+				+0.6
2,817,231	+				-1.1
2,817,231	+				-0.0
2,817,231	+				-0.2
2,817,231	+				-0.6
2,817,231	+				-0.9
2,817,231	+				-0.2
2,817,232	-				+0.9
2,817,232	-				-1.9
2,817,232	-				-0.3
2,817,232	-				+0.8
2,817,232	-				+0.5
2,817,264	+				-1.7
2,817,275	+				+1.7
2,817,275	+				+0.2
2,817,276	-				+0.9
2,817,484	-				+0.1
2,817,537	+				+0.3
2,817,540	+				-0.0
2,817,610	-		Psest_2635	0.12	-1.6
2,817,855	+		Psest_2635	0.24	-0.3
2,817,877	-		Psest_2635	0.25	-1.1
2,817,925	-		Psest_2635	0.28	-0.4
2,817,925	-		Psest_2635	0.28	+0.1
2,817,925	-		Psest_2635	0.28	-0.1
2,817,968	+		Psest_2635	0.30	-1.9
2,817,968	+		Psest_2635	0.30	-1.8
2,817,968	+		Psest_2635	0.30	-0.1
2,817,968	+		Psest_2635	0.30	-0.1
2,817,969	-		Psest_2635	0.30	-0.5
2,817,969	-		Psest_2635	0.30	-0.5
2,817,969	-		Psest_2635	0.30	+0.6
2,817,969	-		Psest_2635	0.30	-1.9
2,817,969	-		Psest_2635	0.30	-0.9
2,818,211	+		Psest_2635	0.42	-0.3
2,818,211	+		Psest_2635	0.42	-0.1
2,818,211	+		Psest_2635	0.42	+0.8
2,818,211	+		Psest_2635	0.42	-0.5
2,818,212	-		Psest_2635	0.42	-0.5
2,818,212	-		Psest_2635	0.42	-0.6
2,818,212	-		Psest_2635	0.42	+0.2
2,818,215	+		Psest_2635	0.42	-0.2
2,818,215	+		Psest_2635	0.42	-0.5
2,818,215	+		Psest_2635	0.42	-1.2
2,818,216	-		Psest_2635	0.42	-0.7
2,818,216	-		Psest_2635	0.42	-1.0
2,818,216	-		Psest_2635	0.42	-0.1
2,818,216	-		Psest_2635	0.42	+1.1
2,818,216	-		Psest_2635	0.42	-1.2
2,818,216	-		Psest_2635	0.42	-0.9
2,818,216	-		Psest_2635	0.42	+0.5
2,818,216	-		Psest_2635	0.42	+0.3
2,818,485	+		Psest_2635	0.55	-1.4
2,818,485	+		Psest_2635	0.55	-0.7
2,818,485	+		Psest_2635	0.55	+0.7
2,818,485	+		Psest_2635	0.55	-0.3
2,818,485	+		Psest_2635	0.55	-0.1
2,818,485	+		Psest_2635	0.55	-1.6
2,818,485	+		Psest_2635	0.55	+0.1
2,818,486	-		Psest_2635	0.55	-0.4
2,818,486	-		Psest_2635	0.55	-0.2
2,818,486	-		Psest_2635	0.55	-0.1
2,818,486	-		Psest_2635	0.55	-0.5
2,818,486	-		Psest_2635	0.55	-1.1
2,818,486	-		Psest_2635	0.55	-0.0
2,818,486	-		Psest_2635	0.55	-0.6
2,818,486	-		Psest_2635	0.55	+0.3
2,818,486	-		Psest_2635	0.55	-0.5
2,818,486	-		Psest_2635	0.55	+0.8
2,818,522	-		Psest_2635	0.57	-1.7
2,818,522	-		Psest_2635	0.57	-1.4
2,818,737	+		Psest_2635	0.67	-0.1
2,818,737	+		Psest_2635	0.67	-1.1
2,818,737	+		Psest_2635	0.67	-0.9
2,818,737	+		Psest_2635	0.67	+0.0
2,818,737	+		Psest_2635	0.67	+0.3
2,818,737	+		Psest_2635	0.67	-1.7
2,818,738	-		Psest_2635	0.67	-0.2
2,818,738	-		Psest_2635	0.67	+0.8
2,818,738	-		Psest_2635	0.67	-0.5
2,818,738	-		Psest_2635	0.67	-0.9
2,818,738	-		Psest_2635	0.67	-1.9
2,818,738	-		Psest_2635	0.67	+0.3
2,818,738	-		Psest_2635	0.67	-0.8
2,818,738	-		Psest_2635	0.67	-0.3
2,818,738	-		Psest_2635	0.67	-0.3
2,818,738	-		Psest_2635	0.67	+0.5
2,818,845	+		Psest_2635	0.72	-2.0
2,818,845	+		Psest_2635	0.72	-1.2
2,818,845	+		Psest_2635	0.72	-0.2
2,818,845	+		Psest_2635	0.72	-0.4
2,818,846	-		Psest_2635	0.72	-0.5
2,818,846	-		Psest_2635	0.72	-0.9
2,818,918	-		Psest_2635	0.76	+0.3
2,818,918	-		Psest_2635	0.76	+0.6
2,818,944	+		Psest_2635	0.77	-0.1
2,818,945	-		Psest_2635	0.77	+0.1
2,819,211	+		Psest_2635	0.90	-1.1
2,819,212	-		Psest_2635	0.90	+0.1
2,819,212	-		Psest_2635	0.90	-2.6
2,819,232	+				+0.1
2,819,233	-				+2.1
2,819,233	-				-1.7
2,819,233	-				-0.4
2,819,267	+				-0.5
2,819,267	+				-0.3
2,819,268	-				-1.4
2,819,268	-				+0.7
2,819,268	-				-0.4
2,819,349	+				-0.7
2,819,350	-				-0.7
2,819,350	-				-0.3
2,819,426	+				-1.4
2,819,451	-				+1.5
2,819,470	+				-0.8
2,819,471	-				-0.2
2,819,471	-				-0.4
2,819,471	-				-0.2
2,819,471	-				+0.3
2,819,785	+				-0.3
2,819,785	+				-1.2
2,819,785	+				+1.5
2,819,785	+				+1.1
2,819,785	+				-0.4
2,819,785	+				-0.7
2,819,785	+				+1.2
2,819,786	-				+0.2
2,819,786	-				+0.1
2,819,786	-				-0.2
2,819,786	-				-0.4
2,819,786	-				+0.3
2,819,886	+				-0.2
2,819,887	-				+0.4
2,819,887	-				-1.1
2,820,019	-		Psest_2636	0.15	-0.7
2,820,019	-		Psest_2636	0.15	-0.1
2,820,019	-		Psest_2636	0.15	-0.4
2,820,087	+		Psest_2636	0.20	+0.6
2,820,087	+		Psest_2636	0.20	+0.0
2,820,087	+		Psest_2636	0.20	-0.1
2,820,088	-		Psest_2636	0.20	+0.2
2,820,088	-		Psest_2636	0.20	-0.5
2,820,088	-		Psest_2636	0.20	-2.2
2,820,088	-		Psest_2636	0.20	-0.4
2,820,088	-		Psest_2636	0.20	+0.7
2,820,088	-		Psest_2636	0.20	-0.6
2,820,380	+		Psest_2636	0.45	+0.7
2,820,397	-		Psest_2636	0.46	-0.8
2,820,418	-		Psest_2636	0.48	+0.2
2,820,418	-		Psest_2636	0.48	-0.7
2,820,418	-		Psest_2636	0.48	-0.9
2,820,418	-		Psest_2636	0.48	+0.5
2,820,418	-		Psest_2636	0.48	-0.5
2,820,418	-		Psest_2636	0.48	-0.2
2,820,418	-		Psest_2636	0.48	-1.4