Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1413

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,519,738	+		Psest_1412	0.49	+0.3
1,519,738	+		Psest_1412	0.49	+0.1
1,519,994	+		Psest_1412	0.71	-0.1
1,519,994	+		Psest_1412	0.71	+0.4
1,519,994	+		Psest_1412	0.71	-0.9
1,520,035	+		Psest_1412	0.74	+0.5
1,520,036	-		Psest_1412	0.74	-0.9
1,520,036	-		Psest_1412	0.74	+2.1
1,520,036	-		Psest_1412	0.74	+0.1
1,520,036	-		Psest_1412	0.74	+0.3
1,520,042	+		Psest_1412	0.75	-0.3
1,520,043	-		Psest_1412	0.75	+1.1
1,520,043	-		Psest_1412	0.75	+0.3
1,520,043	-		Psest_1412	0.75	+0.5
1,520,043	-		Psest_1412	0.75	-0.4
1,520,043	-		Psest_1412	0.75	-0.9
1,520,175	+		Psest_1412	0.86	+0.4
1,520,176	-		Psest_1412	0.86	-0.5
1,520,176	-		Psest_1412	0.86	+1.7
1,520,176	-		Psest_1412	0.86	+0.9
1,520,176	-		Psest_1412	0.86	+1.7
1,520,176	-		Psest_1412	0.86	-0.1
1,520,323	+				-0.3
1,520,323	+				+0.3
1,520,323	+				+0.0
1,520,324	-				-1.9
1,520,324	-				+1.1
1,520,324	-				+0.1
1,520,327	+				+0.3
1,520,328	-				+0.1
1,520,328	-				-1.2
1,520,552	+				+0.1
1,520,553	-				+0.4
1,520,553	-				+0.1
1,520,553	-				-1.1
1,520,572	+				-1.5
1,520,572	+				-0.6
1,520,572	+				-2.0
1,520,572	+				-0.9
1,520,572	+				+1.1
1,520,572	+				+0.2
1,520,572	+				+0.6
1,520,572	+				-0.5
1,520,572	+				-1.1
1,520,573	-				-0.9
1,520,573	-				-1.5
1,520,573	-				-1.2
1,520,573	-				+0.4
1,520,573	-				+0.1
1,520,573	-				-0.4
1,520,573	-				-0.3
1,520,624	+				+1.1
1,520,624	+				+0.5
1,520,624	+				+0.3
1,520,749	+				-0.2
1,520,749	+				-0.4
1,520,750	-				+0.5
1,520,750	-				-0.6
1,520,750	-				-1.2
1,520,750	-				+0.3
1,520,884	+		Psest_1413	0.15	-0.1
1,520,884	+		Psest_1413	0.15	-0.5
1,520,884	+		Psest_1413	0.15	-1.9
1,520,885	-		Psest_1413	0.15	-1.2
1,520,885	-		Psest_1413	0.15	+0.1
1,520,885	-		Psest_1413	0.15	-0.1
1,520,953	+		Psest_1413	0.19	-0.8
1,520,953	+		Psest_1413	0.19	-0.4
1,520,953	+		Psest_1413	0.19	-1.9
1,520,953	+		Psest_1413	0.19	-0.6
1,520,953	+		Psest_1413	0.19	-0.6
1,520,953	+		Psest_1413	0.19	+0.5
1,520,953	+		Psest_1413	0.19	+0.3
1,520,953	+		Psest_1413	0.19	-1.2
1,520,953	+		Psest_1413	0.19	+0.5
1,520,954	-		Psest_1413	0.19	-0.6
1,520,954	-		Psest_1413	0.19	-1.2
1,521,146	-		Psest_1413	0.30	-0.5
1,521,196	+		Psest_1413	0.33	-0.8
1,521,197	-		Psest_1413	0.33	-1.1
1,521,197	-		Psest_1413	0.33	-1.4
1,521,289	+		Psest_1413	0.39	-0.5
1,521,289	+		Psest_1413	0.39	+0.3
1,521,289	+		Psest_1413	0.39	+1.1
1,521,289	+		Psest_1413	0.39	+0.6
1,521,289	+		Psest_1413	0.39	+0.6
1,521,289	+		Psest_1413	0.39	+0.2
1,521,290	-		Psest_1413	0.39	-0.5
1,521,290	-		Psest_1413	0.39	+0.2
1,521,298	-		Psest_1413	0.39	+0.4
1,521,425	-		Psest_1413	0.47	+0.2
1,521,425	-		Psest_1413	0.47	-1.5
1,521,532	+		Psest_1413	0.53	-0.8
1,521,532	+		Psest_1413	0.53	-1.2
1,521,533	-		Psest_1413	0.53	+1.1
1,521,533	-		Psest_1413	0.53	-0.5
1,521,586	+		Psest_1413	0.57	+0.4
1,521,778	+		Psest_1413	0.68	+0.3
1,521,778	+		Psest_1413	0.68	-0.9
1,521,778	+		Psest_1413	0.68	-2.1
1,521,779	-		Psest_1413	0.68	+1.1
1,521,779	-		Psest_1413	0.68	-0.6
1,521,779	-		Psest_1413	0.68	-0.5
1,521,796	+		Psest_1413	0.69	+0.4
1,521,797	-		Psest_1413	0.69	+0.5
1,521,986	+		Psest_1413	0.81	-0.0
1,521,986	+		Psest_1413	0.81	-1.0
1,521,987	-		Psest_1413	0.81	-1.2
1,521,987	-		Psest_1413	0.81	-1.1
1,521,987	-		Psest_1413	0.81	+1.1
1,522,051	+		Psest_1413	0.84	-0.7
1,522,051	+		Psest_1413	0.84	-0.4
1,522,129	+		Psest_1413	0.89	-0.2
1,522,129	+		Psest_1413	0.89	+0.2
1,522,129	+		Psest_1413	0.89	-1.5
1,522,129	+		Psest_1413	0.89	+0.2
1,522,129	+		Psest_1413	0.89	-0.9
1,522,129	+		Psest_1413	0.89	+1.5
1,522,129	+		Psest_1413	0.89	-0.4
1,522,129	+		Psest_1413	0.89	+1.1
1,522,129	+		Psest_1413	0.89	-1.2
1,522,130	-		Psest_1413	0.89	+0.1
1,522,130	-		Psest_1413	0.89	-1.7
1,522,130	-		Psest_1413	0.89	-0.1
1,522,130	-		Psest_1413	0.89	-0.2
1,522,130	-		Psest_1413	0.89	-1.7
1,522,130	-		Psest_1413	0.89	-0.1
1,522,130	-		Psest_1413	0.89	-0.7
1,522,130	-		Psest_1413	0.89	+1.7
1,522,130	-		Psest_1413	0.89	-1.1
1,522,130	-		Psest_1413	0.89	+0.3
1,522,130	-		Psest_1413	0.89	+0.5
1,522,130	-		Psest_1413	0.89	-1.1
1,522,130	-		Psest_1413	0.89	+0.1
1,522,130	-		Psest_1413	0.89	-0.5
1,522,130	-		Psest_1413	0.89	-2.0
1,522,132	+		Psest_1413	0.89	+0.7
1,522,132	+		Psest_1413	0.89	+0.6
1,522,132	+		Psest_1413	0.89	-1.7
1,522,303	-				-0.0
1,522,390	+				+1.1
1,522,390	+				+1.3
1,522,390	+				+1.1
1,522,391	-				-1.4
1,522,391	-				-0.0
1,522,444	+				+0.8
1,522,456	+				+1.1
1,522,495	+		Psest_1414	0.13	-0.5
1,522,495	+		Psest_1414	0.13	-1.7
1,522,495	+		Psest_1414	0.13	-2.6
1,522,495	+		Psest_1414	0.13	-0.2
1,522,495	+		Psest_1414	0.13	-0.1
1,522,495	+		Psest_1414	0.13	+0.3
1,522,495	+		Psest_1414	0.13	-0.4
1,522,496	-		Psest_1414	0.13	-1.2
1,522,496	-		Psest_1414	0.13	+0.4
1,522,496	-		Psest_1414	0.13	+0.8
1,522,496	-		Psest_1414	0.13	-1.7
1,522,762	-		Psest_1414	0.81	+1.7
1,522,780	+		Psest_1414	0.86	+1.5
1,522,781	-		Psest_1414	0.86	+1.4
1,522,781	-		Psest_1414	0.86	+0.1
1,522,781	-		Psest_1414	0.86	-1.4
1,522,781	-		Psest_1414	0.86	+0.4
1,522,781	-		Psest_1414	0.86	-1.7
1,522,803	-				+0.1
1,522,803	-				-2.7
1,522,821	+				-0.4
1,522,821	+				-0.5
1,522,821	+				+0.4
1,522,821	+				-1.5
1,522,821	+				-0.2
1,522,821	+				-2.4
1,522,821	+				+0.7
1,522,821	+				+0.1
1,522,821	+				-1.2
1,522,821	+				+0.4
1,522,821	+				-2.2
1,522,822	-				+0.1
1,522,822	-				-0.1
1,522,822	-				-0.3
1,522,822	-				-0.5
1,522,822	-				+0.3
1,522,822	-				-0.2
1,522,847	+				-0.5
1,522,886	+				-0.9
1,522,886	+				-0.2
1,522,887	-				+0.1
1,522,887	-				-1.2
1,523,155	+				+1.3
1,523,179	+				+0.5
1,523,214	+				-0.2
1,523,215	-				-0.9
1,523,225	+				-1.4
1,523,226	-				-1.9
1,523,226	-				+0.1
1,523,226	-				-2.2