Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2763 and Dsui_2764 are separated by 142 nucleotides Dsui_2764 and Dsui_2765 are separated by 4 nucleotides Dsui_2765 and Dsui_2766 are separated by 79 nucleotides
Dsui_2763: Dsui_2763 - ribosome biogenesis GTP-binding protein YlqF, at 2,922,160 to 2,923,074
_2763
Dsui_2764: Dsui_2764 - hypothetical protein, at 2,923,217 to 2,923,468
_2764
Dsui_2765: Dsui_2765 - putative membrane protein, at 2,923,473 to 2,924,222
_2765
Dsui_2766: Dsui_2766 - putative homoserine kinase type II (protein kinase fold), at 2,924,302 to 2,925,309
_2766
Position (kb)
2923
2924
2925 Strain fitness (log2 ratio)
-1
0
1 at 2923.115 kb on - strand at 2923.222 kb on - strand at 2923.370 kb on - strand, within Dsui_2764 at 2923.493 kb on + strand at 2923.501 kb on - strand at 2923.510 kb on + strand at 2923.511 kb on - strand at 2923.555 kb on + strand, within Dsui_2765 at 2923.597 kb on + strand, within Dsui_2765 at 2923.696 kb on - strand, within Dsui_2765 at 2923.788 kb on - strand, within Dsui_2765 at 2923.799 kb on - strand, within Dsui_2765 at 2923.822 kb on + strand, within Dsui_2765 at 2923.887 kb on + strand, within Dsui_2765 at 2924.057 kb on + strand, within Dsui_2765 at 2924.139 kb on - strand, within Dsui_2765 at 2924.139 kb on - strand, within Dsui_2765 at 2924.159 kb on + strand at 2924.209 kb on - strand at 2924.270 kb on + strand at 2924.326 kb on + strand at 2924.484 kb on + strand, within Dsui_2766 at 2924.610 kb on - strand at 2924.784 kb on + strand, within Dsui_2766 at 2924.868 kb on - strand at 2924.944 kb on + strand, within Dsui_2766 at 2925.008 kb on + strand, within Dsui_2766 at 2925.107 kb on + strand, within Dsui_2766 at 2925.210 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 2,923,115 - +0.0 2,923,222 - -0.8 2,923,370 - Dsui_2764 0.61 +0.8 2,923,493 + -0.3 2,923,501 - +0.4 2,923,510 + -0.1 2,923,511 - -0.2 2,923,555 + Dsui_2765 0.11 +0.4 2,923,597 + Dsui_2765 0.17 +0.7 2,923,696 - Dsui_2765 0.30 +1.2 2,923,788 - Dsui_2765 0.42 +0.1 2,923,799 - Dsui_2765 0.43 +0.3 2,923,822 + Dsui_2765 0.47 +1.2 2,923,887 + Dsui_2765 0.55 +1.1 2,924,057 + Dsui_2765 0.78 +0.7 2,924,139 - Dsui_2765 0.89 +0.2 2,924,139 - Dsui_2765 0.89 -0.7 2,924,159 + +1.7 2,924,209 - -0.4 2,924,270 + +0.2 2,924,326 + -0.2 2,924,484 + Dsui_2766 0.18 -1.2 2,924,610 - +1.7 2,924,784 + Dsui_2766 0.48 +1.0 2,924,868 - -0.3 2,924,944 + Dsui_2766 0.64 -0.6 2,925,008 + Dsui_2766 0.70 +0.3 2,925,107 + Dsui_2766 0.80 -0.5 2,925,210 + -1.1
Or see this region's nucleotide sequence