Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2307 and Dsui_2308 are separated by 16 nucleotides Dsui_2308 and Dsui_2309 overlap by 14 nucleotides Dsui_2309 and Dsui_2310 are separated by 37 nucleotides
Dsui_2307: Dsui_2307 - putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,463,555 to 2,464,214
_2307
Dsui_2308: Dsui_2308 - lysophospholipase L1-like esterase, at 2,464,231 to 2,464,854
_2308
Dsui_2309: Dsui_2309 - selenium donor protein, at 2,464,841 to 2,465,887
_2309
Dsui_2310: Dsui_2310 - tRNA 2-selenouridine synthase, at 2,465,925 to 2,467,013
_2310
Position (kb)
2464
2465
2466 Strain fitness (log2 ratio)
-2
-1
0
1 at 2463.898 kb on - strand, within Dsui_2307 at 2464.052 kb on + strand at 2464.060 kb on - strand, within Dsui_2307 at 2464.130 kb on + strand, within Dsui_2307 at 2464.132 kb on - strand, within Dsui_2307 at 2464.169 kb on - strand at 2464.189 kb on + strand at 2464.189 kb on + strand at 2464.194 kb on + strand at 2464.197 kb on - strand at 2464.197 kb on - strand at 2464.202 kb on - strand at 2464.231 kb on - strand at 2464.302 kb on + strand, within Dsui_2308 at 2464.304 kb on - strand, within Dsui_2308 at 2464.315 kb on - strand, within Dsui_2308 at 2464.467 kb on - strand, within Dsui_2308 at 2464.579 kb on + strand, within Dsui_2308 at 2464.584 kb on + strand, within Dsui_2308 at 2464.616 kb on - strand, within Dsui_2308 at 2464.616 kb on - strand, within Dsui_2308 at 2464.709 kb on - strand, within Dsui_2308 at 2464.766 kb on - strand, within Dsui_2308 at 2464.787 kb on - strand, within Dsui_2308 at 2464.834 kb on + strand at 2464.970 kb on - strand, within Dsui_2309 at 2465.003 kb on - strand, within Dsui_2309 at 2465.167 kb on - strand, within Dsui_2309 at 2465.327 kb on - strand, within Dsui_2309 at 2465.331 kb on - strand, within Dsui_2309 at 2465.358 kb on + strand, within Dsui_2309 at 2465.366 kb on - strand, within Dsui_2309 at 2465.394 kb on - strand, within Dsui_2309 at 2465.437 kb on - strand, within Dsui_2309 at 2465.466 kb on + strand, within Dsui_2309 at 2465.726 kb on - strand, within Dsui_2309 at 2465.807 kb on + strand at 2465.913 kb on - strand at 2466.148 kb on - strand at 2466.156 kb on + strand, within Dsui_2310 at 2466.166 kb on + strand, within Dsui_2310 at 2466.319 kb on + strand, within Dsui_2310 at 2466.343 kb on + strand, within Dsui_2310 at 2466.389 kb on + strand, within Dsui_2310 at 2466.528 kb on + strand, within Dsui_2310 at 2466.647 kb on + strand, within Dsui_2310 at 2466.673 kb on + strand, within Dsui_2310 at 2466.827 kb on - strand, within Dsui_2310 at 2466.852 kb on + strand, within Dsui_2310
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 2,463,898 - Dsui_2307 0.52 -0.2 2,464,052 + +1.6 2,464,060 - Dsui_2307 0.77 -0.1 2,464,130 + Dsui_2307 0.87 -0.8 2,464,132 - Dsui_2307 0.87 -0.6 2,464,169 - +0.3 2,464,189 + -0.9 2,464,189 + -1.1 2,464,194 + -0.0 2,464,197 - +0.7 2,464,197 - -0.2 2,464,202 - -0.2 2,464,231 - +0.5 2,464,302 + Dsui_2308 0.11 +0.1 2,464,304 - Dsui_2308 0.12 -0.9 2,464,315 - Dsui_2308 0.13 -0.2 2,464,467 - Dsui_2308 0.38 -1.8 2,464,579 + Dsui_2308 0.56 +0.1 2,464,584 + Dsui_2308 0.57 +0.6 2,464,616 - Dsui_2308 0.62 +0.1 2,464,616 - Dsui_2308 0.62 -2.7 2,464,709 - Dsui_2308 0.77 -0.2 2,464,766 - Dsui_2308 0.86 +0.2 2,464,787 - Dsui_2308 0.89 -0.3 2,464,834 + -0.9 2,464,970 - Dsui_2309 0.12 +0.5 2,465,003 - Dsui_2309 0.15 +0.1 2,465,167 - Dsui_2309 0.31 -0.3 2,465,327 - Dsui_2309 0.46 -0.6 2,465,331 - Dsui_2309 0.47 -0.5 2,465,358 + Dsui_2309 0.49 -0.3 2,465,366 - Dsui_2309 0.50 -0.1 2,465,394 - Dsui_2309 0.53 +0.1 2,465,437 - Dsui_2309 0.57 -0.7 2,465,466 + Dsui_2309 0.60 -0.9 2,465,726 - Dsui_2309 0.85 -0.2 2,465,807 + +0.5 2,465,913 - -0.2 2,466,148 - +0.1 2,466,156 + Dsui_2310 0.21 -0.1 2,466,166 + Dsui_2310 0.22 +1.3 2,466,319 + Dsui_2310 0.36 -1.1 2,466,343 + Dsui_2310 0.38 -0.8 2,466,389 + Dsui_2310 0.43 -1.2 2,466,528 + Dsui_2310 0.55 +0.1 2,466,647 + Dsui_2310 0.66 -1.2 2,466,673 + Dsui_2310 0.69 -1.7 2,466,827 - Dsui_2310 0.83 +0.1 2,466,852 + Dsui_2310 0.85 +0.5
Or see this region's nucleotide sequence