Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1884 and Dsui_1885 are separated by 13 nucleotides Dsui_1885 and Dsui_1886 overlap by 8 nucleotides
Dsui_1884: Dsui_1884 - histidine kinase, at 1,982,664 to 1,983,827
_1884
Dsui_1885: Dsui_1885 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,983,841 to 1,984,383
_1885
Dsui_1886: Dsui_1886 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 1,984,376 to 1,985,689
_1886
Position (kb)
1983
1984
1985 Strain fitness (log2 ratio)
-1
0
1 at 1982.849 kb on - strand, within Dsui_1884 at 1983.040 kb on - strand, within Dsui_1884 at 1983.136 kb on + strand, within Dsui_1884 at 1983.293 kb on + strand at 1983.421 kb on + strand, within Dsui_1884 at 1983.435 kb on - strand, within Dsui_1884 at 1983.634 kb on - strand, within Dsui_1884 at 1984.038 kb on - strand, within Dsui_1885 at 1984.043 kb on - strand, within Dsui_1885 at 1984.083 kb on - strand, within Dsui_1885 at 1984.091 kb on + strand, within Dsui_1885 at 1984.223 kb on - strand, within Dsui_1885 at 1984.243 kb on - strand, within Dsui_1885 at 1984.256 kb on + strand, within Dsui_1885 at 1984.406 kb on + strand at 1984.520 kb on + strand, within Dsui_1886 at 1984.673 kb on + strand at 1984.680 kb on - strand, within Dsui_1886 at 1984.680 kb on - strand, within Dsui_1886 at 1984.737 kb on + strand, within Dsui_1886 at 1984.809 kb on - strand, within Dsui_1886 at 1984.848 kb on - strand, within Dsui_1886 at 1984.929 kb on - strand, within Dsui_1886 at 1985.011 kb on + strand at 1985.162 kb on - strand, within Dsui_1886 at 1985.190 kb on - strand, within Dsui_1886 at 1985.190 kb on - strand, within Dsui_1886 at 1985.195 kb on + strand, within Dsui_1886 at 1985.293 kb on - strand, within Dsui_1886 at 1985.366 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,982,849 - Dsui_1884 0.16 -0.5 1,983,040 - Dsui_1884 0.32 +0.4 1,983,136 + Dsui_1884 0.41 +0.5 1,983,293 + +0.7 1,983,421 + Dsui_1884 0.65 -0.1 1,983,435 - Dsui_1884 0.66 -0.3 1,983,634 - Dsui_1884 0.83 -1.1 1,984,038 - Dsui_1885 0.36 +0.6 1,984,043 - Dsui_1885 0.37 +0.3 1,984,083 - Dsui_1885 0.45 +0.6 1,984,091 + Dsui_1885 0.46 +0.1 1,984,223 - Dsui_1885 0.70 +0.8 1,984,243 - Dsui_1885 0.74 +0.1 1,984,256 + Dsui_1885 0.76 -0.0 1,984,406 + -0.7 1,984,520 + Dsui_1886 0.11 +0.2 1,984,673 + +1.7 1,984,680 - Dsui_1886 0.23 +0.1 1,984,680 - Dsui_1886 0.23 +0.3 1,984,737 + Dsui_1886 0.27 -0.1 1,984,809 - Dsui_1886 0.33 +0.1 1,984,848 - Dsui_1886 0.36 -0.4 1,984,929 - Dsui_1886 0.42 +0.7 1,985,011 + +1.7 1,985,162 - Dsui_1886 0.60 -0.0 1,985,190 - Dsui_1886 0.62 -0.4 1,985,190 - Dsui_1886 0.62 -0.8 1,985,195 + Dsui_1886 0.62 -0.1 1,985,293 - Dsui_1886 0.70 +1.0 1,985,366 + +1.2
Or see this region's nucleotide sequence