Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1374 and Dsui_1375 are separated by 36 nucleotides Dsui_1375 and Dsui_1376 are separated by 131 nucleotides Dsui_1376 and Dsui_1377 are separated by 218 nucleotides
Dsui_1374: Dsui_1374 - Protein of unknown function (DUF540), at 1,431,207 to 1,431,974
_1374
Dsui_1375: Dsui_1375 - putative nuleotide-utilizing enzyme, moeA, at 1,432,011 to 1,432,799
_1375
Dsui_1376: Dsui_1376 - phasin family protein, at 1,432,931 to 1,433,488
_1376
Dsui_1377: Dsui_1377 - phasin family protein, at 1,433,707 to 1,434,282
_1377
Position (kb)
1432
1433
1434 Strain fitness (log2 ratio)
-2
-1
0
1 at 1431.955 kb on + strand at 1432.008 kb on + strand at 1432.015 kb on - strand at 1432.035 kb on + strand at 1432.148 kb on - strand at 1432.388 kb on - strand, within Dsui_1375 at 1432.424 kb on + strand, within Dsui_1375 at 1432.430 kb on - strand, within Dsui_1375 at 1432.448 kb on + strand, within Dsui_1375 at 1432.503 kb on - strand, within Dsui_1375 at 1432.517 kb on - strand, within Dsui_1375 at 1432.636 kb on + strand, within Dsui_1375 at 1432.823 kb on + strand at 1432.900 kb on - strand at 1433.089 kb on - strand, within Dsui_1376 at 1433.164 kb on + strand, within Dsui_1376 at 1433.245 kb on - strand, within Dsui_1376 at 1433.252 kb on - strand, within Dsui_1376 at 1433.269 kb on + strand, within Dsui_1376 at 1433.278 kb on - strand, within Dsui_1376 at 1433.285 kb on - strand, within Dsui_1376 at 1433.323 kb on + strand, within Dsui_1376 at 1433.410 kb on - strand, within Dsui_1376 at 1433.412 kb on + strand, within Dsui_1376 at 1433.412 kb on + strand, within Dsui_1376 at 1433.419 kb on - strand, within Dsui_1376 at 1433.419 kb on - strand, within Dsui_1376 at 1433.420 kb on - strand, within Dsui_1376 at 1433.457 kb on + strand at 1433.457 kb on + strand at 1433.457 kb on + strand at 1433.465 kb on - strand at 1433.465 kb on - strand at 1433.465 kb on - strand at 1433.465 kb on - strand at 1433.495 kb on + strand at 1433.507 kb on + strand at 1433.522 kb on - strand at 1433.531 kb on - strand at 1433.531 kb on - strand at 1433.570 kb on + strand at 1433.570 kb on + strand at 1433.621 kb on - strand at 1433.621 kb on - strand at 1433.648 kb on + strand at 1433.704 kb on + strand at 1433.814 kb on + strand, within Dsui_1377 at 1434.050 kb on + strand, within Dsui_1377 at 1434.058 kb on - strand, within Dsui_1377 at 1434.070 kb on + strand at 1434.116 kb on + strand at 1434.124 kb on - strand, within Dsui_1377 at 1434.258 kb on + strand at 1434.266 kb on - strand at 1434.285 kb on - strand at 1434.299 kb on - strand at 1434.299 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,431,955 + +0.4 1,432,008 + -0.7 1,432,015 - +1.2 1,432,035 + -0.2 1,432,148 - +1.5 1,432,388 - Dsui_1375 0.48 -0.1 1,432,424 + Dsui_1375 0.52 +0.3 1,432,430 - Dsui_1375 0.53 +0.2 1,432,448 + Dsui_1375 0.55 +0.0 1,432,503 - Dsui_1375 0.62 +0.2 1,432,517 - Dsui_1375 0.64 +0.1 1,432,636 + Dsui_1375 0.79 +0.9 1,432,823 + -0.1 1,432,900 - +0.2 1,433,089 - Dsui_1376 0.28 -0.4 1,433,164 + Dsui_1376 0.42 -0.5 1,433,245 - Dsui_1376 0.56 +0.3 1,433,252 - Dsui_1376 0.58 +0.6 1,433,269 + Dsui_1376 0.61 +0.3 1,433,278 - Dsui_1376 0.62 -0.1 1,433,285 - Dsui_1376 0.63 +0.5 1,433,323 + Dsui_1376 0.70 +0.6 1,433,410 - Dsui_1376 0.86 +0.3 1,433,412 + Dsui_1376 0.86 +0.1 1,433,412 + Dsui_1376 0.86 +0.3 1,433,419 - Dsui_1376 0.87 +0.7 1,433,419 - Dsui_1376 0.87 +0.2 1,433,420 - Dsui_1376 0.88 +0.5 1,433,457 + +0.3 1,433,457 + +0.4 1,433,457 + +0.2 1,433,465 - +0.1 1,433,465 - +0.5 1,433,465 - -0.5 1,433,465 - -0.5 1,433,495 + -0.4 1,433,507 + +0.8 1,433,522 - +0.3 1,433,531 - +1.0 1,433,531 - +0.6 1,433,570 + +0.1 1,433,570 + +0.7 1,433,621 - +0.4 1,433,621 - +1.0 1,433,648 + +0.6 1,433,704 + +0.3 1,433,814 + Dsui_1377 0.19 -1.4 1,434,050 + Dsui_1377 0.60 -0.9 1,434,058 - Dsui_1377 0.61 -0.7 1,434,070 + -1.5 1,434,116 + -0.8 1,434,124 - Dsui_1377 0.72 -1.1 1,434,258 + -1.8 1,434,266 - -1.0 1,434,285 - -1.6 1,434,299 - -0.2 1,434,299 - -0.3
Or see this region's nucleotide sequence