Strain Fitness in Dechlorosoma suillum PS around Dsui_0746

Experiment: Anaero. lactate (C), chlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0745 and Dsui_0746 overlap by 13 nucleotidesDsui_0746 and Dsui_0747 are separated by 94 nucleotides Dsui_0745: Dsui_0745 - membrane-associated lipoprotein involved in thiamine biosynthesis, at 742,780 to 743,820 _0745 Dsui_0746: Dsui_0746 - glutathione synthetase, at 743,808 to 744,755 _0746 Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130 _0747 Position (kb) 743 744 745Strain fitness (log2 ratio) -2 -1 0 1at 742.811 kb on - strandat 742.811 kb on - strandat 742.954 kb on - strand, within Dsui_0745at 742.959 kb on - strand, within Dsui_0745at 743.025 kb on - strand, within Dsui_0745at 743.076 kb on + strandat 743.138 kb on - strand, within Dsui_0745at 743.281 kb on + strand, within Dsui_0745at 743.771 kb on + strandat 743.863 kb on - strandat 743.955 kb on - strand, within Dsui_0746at 744.017 kb on + strand, within Dsui_0746at 744.104 kb on - strand, within Dsui_0746at 744.137 kb on - strand, within Dsui_0746at 744.152 kb on - strand, within Dsui_0746at 744.165 kb on + strand, within Dsui_0746at 744.192 kb on + strand, within Dsui_0746at 744.245 kb on + strandat 744.325 kb on - strand, within Dsui_0746at 744.350 kb on - strand, within Dsui_0746at 744.358 kb on - strand, within Dsui_0746at 744.403 kb on + strand, within Dsui_0746at 744.436 kb on + strand, within Dsui_0746at 744.438 kb on - strand, within Dsui_0746at 744.455 kb on + strandat 744.459 kb on + strandat 744.471 kb on - strand, within Dsui_0746at 744.545 kb on - strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.654 kb on + strand, within Dsui_0746at 744.712 kb on + strandat 744.712 kb on + strandat 744.712 kb on + strandat 744.717 kb on + strandat 744.720 kb on - strandat 744.722 kb on + strandat 744.722 kb on + strandat 744.803 kb on + strandat 744.829 kb on - strandat 744.840 kb on + strandat 744.955 kb on - strandat 744.999 kb on - strand, within Dsui_0747at 745.019 kb on - strand, within Dsui_0747at 745.143 kb on - strand, within Dsui_0747at 745.178 kb on - strand, within Dsui_0747at 745.189 kb on - strand, within Dsui_0747at 745.607 kb on - strand, within Dsui_0747at 745.614 kb on + strandat 745.683 kb on + strand, within Dsui_0747at 745.701 kb on + strand, within Dsui_0747at 745.709 kb on - strand, within Dsui_0747

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor
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742,811 - -0.3
742,811 - -1.1
742,954 - Dsui_0745 0.17 -1.9
742,959 - Dsui_0745 0.17 -0.6
743,025 - Dsui_0745 0.24 -1.1
743,076 + -1.6
743,138 - Dsui_0745 0.34 -2.0
743,281 + Dsui_0745 0.48 -1.1
743,771 + -0.6
743,863 - -0.6
743,955 - Dsui_0746 0.16 -0.6
744,017 + Dsui_0746 0.22 -0.6
744,104 - Dsui_0746 0.31 -0.8
744,137 - Dsui_0746 0.35 -0.3
744,152 - Dsui_0746 0.36 -1.4
744,165 + Dsui_0746 0.38 -1.3
744,192 + Dsui_0746 0.41 +0.1
744,245 + +0.4
744,325 - Dsui_0746 0.55 -0.2
744,350 - Dsui_0746 0.57 -0.6
744,358 - Dsui_0746 0.58 -0.3
744,403 + Dsui_0746 0.63 -0.6
744,436 + Dsui_0746 0.66 -0.8
744,438 - Dsui_0746 0.66 +0.1
744,455 + -1.4
744,459 + -0.1
744,471 - Dsui_0746 0.70 -0.7
744,545 - Dsui_0746 0.78 -0.9
744,626 + Dsui_0746 0.86 +1.0
744,626 + Dsui_0746 0.86 -0.2
744,654 + Dsui_0746 0.89 -1.0
744,712 + -0.3
744,712 + +0.4
744,712 + -0.0
744,717 + -0.1
744,720 - -0.3
744,722 + +0.1
744,722 + -1.2
744,803 + -1.4
744,829 - +0.2
744,840 + -0.1
744,955 - +0.4
744,999 - Dsui_0747 0.12 +0.3
745,019 - Dsui_0747 0.13 -0.1
745,143 - Dsui_0747 0.23 -2.7
745,178 - Dsui_0747 0.26 -1.0
745,189 - Dsui_0747 0.26 -0.4
745,607 - Dsui_0747 0.59 -1.4
745,614 + +1.4
745,683 + Dsui_0747 0.65 +0.2
745,701 + Dsui_0747 0.66 -0.6
745,709 - Dsui_0747 0.67 -1.7

Or see this region's nucleotide sequence