Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0583 and Dsui_0584 overlap by 4 nucleotides Dsui_0584 and Dsui_0585 are separated by 7 nucleotides Dsui_0585 and Dsui_0586 are separated by 164 nucleotides
Dsui_0583: Dsui_0583 - ABC-type Mn2+/Zn2+ transport system, permease component, at 581,094 to 581,912
_0583
Dsui_0584: Dsui_0584 - ATPase component of Mn/Zn ABC-type transporter, at 581,909 to 582,502
_0584
Dsui_0585: Dsui_0585 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 582,510 to 583,403
_0585
Dsui_0586: Dsui_0586 - hypothetical protein, at 583,568 to 585,022
_0586
Position (kb) 582
583
584 Strain fitness (log2 ratio) -1
0
1
2 at 581.555 kb on - strand, within Dsui_0583 at 581.609 kb on + strand at 581.744 kb on - strand, within Dsui_0583 at 581.827 kb on - strand, within Dsui_0583 at 581.921 kb on - strand at 581.984 kb on - strand at 582.372 kb on + strand, within Dsui_0584 at 582.406 kb on + strand, within Dsui_0584 at 582.451 kb on - strand at 582.481 kb on - strand at 582.485 kb on + strand at 582.516 kb on - strand at 582.531 kb on - strand at 582.570 kb on + strand at 582.688 kb on + strand at 582.781 kb on - strand at 582.835 kb on + strand, within Dsui_0585 at 582.835 kb on + strand, within Dsui_0585 at 582.858 kb on - strand, within Dsui_0585 at 583.021 kb on + strand, within Dsui_0585 at 583.044 kb on + strand, within Dsui_0585 at 583.070 kb on + strand at 583.158 kb on + strand, within Dsui_0585 at 583.166 kb on - strand, within Dsui_0585 at 583.225 kb on + strand at 583.276 kb on + strand at 583.305 kb on + strand, within Dsui_0585 at 583.313 kb on - strand, within Dsui_0585 at 583.318 kb on + strand at 583.364 kb on + strand at 583.374 kb on - strand at 583.437 kb on - strand at 583.597 kb on + strand at 583.599 kb on + strand at 583.607 kb on - strand at 583.649 kb on - strand at 583.695 kb on - strand at 583.734 kb on - strand, within Dsui_0586 at 583.800 kb on - strand, within Dsui_0586 at 583.807 kb on - strand, within Dsui_0586 at 584.094 kb on - strand, within Dsui_0586 at 584.237 kb on + strand, within Dsui_0586 at 584.311 kb on + strand at 584.365 kb on - strand, within Dsui_0586
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 581,555 - Dsui_0583 0.56 -1.0 581,609 + -0.5 581,744 - Dsui_0583 0.79 -0.5 581,827 - Dsui_0583 0.89 +0.5 581,921 - -0.9 581,984 - +1.1 582,372 + Dsui_0584 0.78 -0.4 582,406 + Dsui_0584 0.84 -0.4 582,451 - +0.4 582,481 - +1.8 582,485 + +0.1 582,516 - -0.2 582,531 - +0.5 582,570 + -0.8 582,688 + +0.5 582,781 - +0.5 582,835 + Dsui_0585 0.36 -0.3 582,835 + Dsui_0585 0.36 +0.6 582,858 - Dsui_0585 0.39 +2.1 583,021 + Dsui_0585 0.57 +0.8 583,044 + Dsui_0585 0.60 +0.2 583,070 + -1.7 583,158 + Dsui_0585 0.72 +0.9 583,166 - Dsui_0585 0.73 +0.2 583,225 + -0.9 583,276 + +0.9 583,305 + Dsui_0585 0.89 -0.2 583,313 - Dsui_0585 0.90 +0.1 583,318 + -0.6 583,364 + +1.5 583,374 - +0.1 583,437 - +0.7 583,597 + -0.3 583,599 + -1.3 583,607 - +0.1 583,649 - -0.2 583,695 - -0.3 583,734 - Dsui_0586 0.11 -0.7 583,800 - Dsui_0586 0.16 -0.0 583,807 - Dsui_0586 0.16 +0.5 584,094 - Dsui_0586 0.36 +0.9 584,237 + Dsui_0586 0.46 +0.8 584,311 + +0.5 584,365 - Dsui_0586 0.55 +0.5
Or see this region's nucleotide sequence