Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3522 and Dsui_3523 are separated by 77 nucleotides Dsui_3523 and Dsui_3524 overlap by 17 nucleotides
Dsui_3522: Dsui_3522 - outer membrane protein, at 3,788,584 to 3,789,840
_3522
Dsui_3523: Dsui_3523 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,789,918 to 3,790,628
_3523
Dsui_3524: Dsui_3524 - signal transduction histidine kinase, at 3,790,612 to 3,792,000
_3524
Position (kb)
3789
3790
3791 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3788.940 kb on + strand at 3789.079 kb on - strand, within Dsui_3522 at 3789.363 kb on - strand, within Dsui_3522 at 3789.419 kb on - strand at 3789.513 kb on + strand, within Dsui_3522 at 3789.513 kb on + strand at 3789.568 kb on - strand, within Dsui_3522 at 3789.694 kb on + strand, within Dsui_3522 at 3789.743 kb on + strand at 3789.745 kb on - strand at 3789.745 kb on - strand at 3789.747 kb on + strand at 3789.751 kb on - strand at 3789.753 kb on + strand at 3789.818 kb on - strand at 3789.820 kb on + strand at 3789.914 kb on - strand at 3789.973 kb on - strand at 3790.048 kb on + strand, within Dsui_3523 at 3790.071 kb on - strand, within Dsui_3523 at 3790.071 kb on - strand, within Dsui_3523 at 3790.120 kb on + strand, within Dsui_3523 at 3790.138 kb on - strand, within Dsui_3523 at 3790.163 kb on - strand at 3790.165 kb on + strand, within Dsui_3523 at 3790.198 kb on - strand, within Dsui_3523 at 3790.357 kb on + strand, within Dsui_3523 at 3790.426 kb on + strand, within Dsui_3523 at 3790.443 kb on - strand, within Dsui_3523 at 3790.482 kb on - strand at 3790.483 kb on - strand, within Dsui_3523 at 3790.518 kb on - strand, within Dsui_3523 at 3790.602 kb on - strand at 3790.622 kb on + strand at 3790.635 kb on - strand at 3790.671 kb on + strand at 3790.757 kb on - strand at 3790.760 kb on + strand, within Dsui_3524 at 3790.768 kb on - strand, within Dsui_3524 at 3790.772 kb on - strand, within Dsui_3524 at 3791.137 kb on - strand, within Dsui_3524 at 3791.231 kb on + strand, within Dsui_3524 at 3791.239 kb on - strand, within Dsui_3524 at 3791.386 kb on + strand, within Dsui_3524 at 3791.506 kb on + strand, within Dsui_3524 at 3791.506 kb on + strand, within Dsui_3524 at 3791.511 kb on + strand, within Dsui_3524 at 3791.511 kb on + strand, within Dsui_3524 at 3791.514 kb on - strand, within Dsui_3524
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 3,788,940 + +1.3 3,789,079 - Dsui_3522 0.39 -1.4 3,789,363 - Dsui_3522 0.62 -0.5 3,789,419 - -1.0 3,789,513 + Dsui_3522 0.74 -1.0 3,789,513 + +0.3 3,789,568 - Dsui_3522 0.78 -0.9 3,789,694 + Dsui_3522 0.88 +0.1 3,789,743 + -0.3 3,789,745 - -1.1 3,789,745 - +0.6 3,789,747 + -1.0 3,789,751 - -0.5 3,789,753 + +0.3 3,789,818 - -0.5 3,789,820 + -1.7 3,789,914 - -0.4 3,789,973 - -1.3 3,790,048 + Dsui_3523 0.18 -0.7 3,790,071 - Dsui_3523 0.22 +0.5 3,790,071 - Dsui_3523 0.22 +0.0 3,790,120 + Dsui_3523 0.28 -1.0 3,790,138 - Dsui_3523 0.31 -1.9 3,790,163 - +0.3 3,790,165 + Dsui_3523 0.35 +0.5 3,790,198 - Dsui_3523 0.39 -0.3 3,790,357 + Dsui_3523 0.62 -0.1 3,790,426 + Dsui_3523 0.71 -0.1 3,790,443 - Dsui_3523 0.74 -2.0 3,790,482 - -0.3 3,790,483 - Dsui_3523 0.79 -0.7 3,790,518 - Dsui_3523 0.84 -2.3 3,790,602 - +0.3 3,790,622 + +1.6 3,790,635 - -0.1 3,790,671 + -0.6 3,790,757 - +1.3 3,790,760 + Dsui_3524 0.11 -0.7 3,790,768 - Dsui_3524 0.11 -0.5 3,790,772 - Dsui_3524 0.12 -0.3 3,791,137 - Dsui_3524 0.38 -1.2 3,791,231 + Dsui_3524 0.45 +0.1 3,791,239 - Dsui_3524 0.45 -1.3 3,791,386 + Dsui_3524 0.56 -3.4 3,791,506 + Dsui_3524 0.64 -0.1 3,791,506 + Dsui_3524 0.64 -2.0 3,791,511 + Dsui_3524 0.65 -1.7 3,791,511 + Dsui_3524 0.65 -1.2 3,791,514 - Dsui_3524 0.65 -1.0
Or see this region's nucleotide sequence