Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3084 and Dsui_3085 are separated by 274 nucleotides Dsui_3085 and Dsui_3086 overlap by 1 nucleotides
Dsui_3084: Dsui_3084 - cysteinyl-tRNA synthetase, at 3,302,052 to 3,303,482
_3084
Dsui_3085: Dsui_3085 - tetratricopeptide repeat protein, at 3,303,757 to 3,304,920
_3085
Dsui_3086: Dsui_3086 - hypothetical protein, at 3,304,920 to 3,306,221
_3086
Position (kb)
3303
3304
3305 Strain fitness (log2 ratio)
-2
-1
0
1 at 3303.550 kb on - strand at 3303.560 kb on - strand at 3303.597 kb on - strand at 3303.631 kb on - strand at 3303.722 kb on - strand at 3303.750 kb on - strand at 3303.768 kb on + strand at 3303.817 kb on + strand at 3303.863 kb on + strand at 3304.080 kb on + strand, within Dsui_3085 at 3304.107 kb on + strand, within Dsui_3085 at 3304.126 kb on + strand, within Dsui_3085 at 3304.137 kb on + strand, within Dsui_3085 at 3304.137 kb on + strand, within Dsui_3085 at 3304.171 kb on + strand, within Dsui_3085 at 3304.234 kb on + strand, within Dsui_3085 at 3304.279 kb on - strand at 3304.281 kb on + strand, within Dsui_3085 at 3304.482 kb on + strand, within Dsui_3085 at 3304.607 kb on - strand, within Dsui_3085 at 3304.644 kb on + strand, within Dsui_3085 at 3304.698 kb on + strand, within Dsui_3085 at 3304.757 kb on - strand at 3304.770 kb on + strand, within Dsui_3085 at 3304.818 kb on + strand at 3305.022 kb on + strand at 3305.130 kb on - strand, within Dsui_3086 at 3305.181 kb on + strand, within Dsui_3086 at 3305.189 kb on - strand at 3305.240 kb on + strand, within Dsui_3086 at 3305.240 kb on + strand, within Dsui_3086 at 3305.307 kb on + strand, within Dsui_3086 at 3305.372 kb on + strand, within Dsui_3086 at 3305.418 kb on + strand, within Dsui_3086 at 3305.439 kb on - strand at 3305.446 kb on - strand, within Dsui_3086 at 3305.480 kb on + strand, within Dsui_3086 at 3305.494 kb on - strand, within Dsui_3086 at 3305.518 kb on + strand, within Dsui_3086 at 3305.526 kb on - strand, within Dsui_3086 at 3305.536 kb on - strand, within Dsui_3086 at 3305.536 kb on - strand, within Dsui_3086 at 3305.559 kb on + strand, within Dsui_3086 at 3305.596 kb on + strand, within Dsui_3086 at 3305.633 kb on - strand, within Dsui_3086
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 3,303,550 - +0.3 3,303,560 - +0.3 3,303,597 - -0.3 3,303,631 - +0.4 3,303,722 - -2.3 3,303,750 - -1.9 3,303,768 + -0.5 3,303,817 + -0.3 3,303,863 + -1.3 3,304,080 + Dsui_3085 0.28 -0.6 3,304,107 + Dsui_3085 0.30 +0.0 3,304,126 + Dsui_3085 0.32 -0.5 3,304,137 + Dsui_3085 0.33 +1.3 3,304,137 + Dsui_3085 0.33 -0.1 3,304,171 + Dsui_3085 0.36 -0.0 3,304,234 + Dsui_3085 0.41 +0.7 3,304,279 - -0.3 3,304,281 + Dsui_3085 0.45 -0.7 3,304,482 + Dsui_3085 0.62 +0.4 3,304,607 - Dsui_3085 0.73 +0.5 3,304,644 + Dsui_3085 0.76 -1.0 3,304,698 + Dsui_3085 0.81 +0.5 3,304,757 - +1.3 3,304,770 + Dsui_3085 0.87 -0.4 3,304,818 + -1.1 3,305,022 + -0.0 3,305,130 - Dsui_3086 0.16 -0.1 3,305,181 + Dsui_3086 0.20 +0.0 3,305,189 - -0.7 3,305,240 + Dsui_3086 0.25 +0.1 3,305,240 + Dsui_3086 0.25 -0.3 3,305,307 + Dsui_3086 0.30 -0.0 3,305,372 + Dsui_3086 0.35 +1.0 3,305,418 + Dsui_3086 0.38 -0.3 3,305,439 - -0.0 3,305,446 - Dsui_3086 0.40 -1.0 3,305,480 + Dsui_3086 0.43 +0.3 3,305,494 - Dsui_3086 0.44 -0.1 3,305,518 + Dsui_3086 0.46 +0.9 3,305,526 - Dsui_3086 0.47 -0.3 3,305,536 - Dsui_3086 0.47 +1.0 3,305,536 - Dsui_3086 0.47 -0.8 3,305,559 + Dsui_3086 0.49 +0.0 3,305,596 + Dsui_3086 0.52 +0.2 3,305,633 - Dsui_3086 0.55 -1.4
Or see this region's nucleotide sequence