Strain Fitness in Dechlorosoma suillum PS around Dsui_3057

Experiment: Anaero. lactate (C), chlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3056 and Dsui_3057 are separated by 238 nucleotidesDsui_3057 and Dsui_3058 are separated by 24 nucleotidesDsui_3058 and Dsui_3059 are separated by 79 nucleotides Dsui_3056: Dsui_3056 - phosphate binding protein, at 3,270,548 to 3,271,540 _3056 Dsui_3057: Dsui_3057 - phosphoglucosamine mutase, at 3,271,779 to 3,273,134 _3057 Dsui_3058: Dsui_3058 - dihydropteroate synthase, at 3,273,159 to 3,273,983 _3058 Dsui_3059: Dsui_3059 - ATP-dependent metalloprotease FtsH, at 3,274,063 to 3,275,946 _3059 Position (kb) 3271 3272 3273 3274Strain fitness (log2 ratio) -1 0 1at 3271.567 kb on - strandat 3271.568 kb on - strandat 3271.573 kb on + strandat 3271.575 kb on - strandat 3271.588 kb on - strandat 3271.590 kb on + strandat 3271.598 kb on - strandat 3271.598 kb on - strandat 3273.174 kb on - strandat 3273.174 kb on - strandat 3273.174 kb on - strandat 3273.989 kb on - strandat 3274.022 kb on - strandat 3274.022 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor
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3,271,567 - +0.1
3,271,568 - +0.7
3,271,573 + -0.7
3,271,575 - +0.4
3,271,588 - -0.7
3,271,590 + +1.3
3,271,598 - +0.4
3,271,598 - +0.3
3,273,174 - +0.2
3,273,174 - -0.4
3,273,174 - +0.6
3,273,989 - -0.8
3,274,022 - +0.6
3,274,022 - +0.4

Or see this region's nucleotide sequence