Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2459 and Dsui_2460 overlap by 8 nucleotides Dsui_2460 and Dsui_2461 overlap by 4 nucleotides Dsui_2461 and Dsui_2462 are separated by 30 nucleotides Dsui_2462 and Dsui_2463 are separated by 67 nucleotides
Dsui_2459: Dsui_2459 - hypothetical protein, at 2,617,667 to 2,618,038
_2459
Dsui_2460: Dsui_2460 - ribonuclease III, at 2,618,031 to 2,618,723
_2460
Dsui_2461: Dsui_2461 - GTP-binding protein Era, at 2,618,720 to 2,619,613
_2461
Dsui_2462: Dsui_2462 - DNA repair protein RecO, at 2,619,644 to 2,620,357
_2462
Dsui_2463: Dsui_2463 - pyridoxine 5''-phosphate synthase, at 2,620,425 to 2,621,177
_2463
Position (kb)
2618
2619
2620 Strain fitness (log2 ratio)
-1
0
1 at 2617.873 kb on + strand, within Dsui_2459 at 2617.887 kb on + strand, within Dsui_2459 at 2618.023 kb on + strand at 2618.023 kb on + strand at 2618.023 kb on + strand at 2618.031 kb on - strand at 2618.031 kb on - strand at 2618.031 kb on - strand at 2618.031 kb on - strand at 2619.597 kb on + strand at 2619.634 kb on + strand at 2619.659 kb on + strand at 2619.683 kb on + strand at 2619.747 kb on + strand, within Dsui_2462 at 2619.747 kb on + strand, within Dsui_2462 at 2619.760 kb on + strand, within Dsui_2462 at 2619.818 kb on + strand, within Dsui_2462 at 2619.829 kb on + strand, within Dsui_2462 at 2619.862 kb on + strand, within Dsui_2462 at 2619.949 kb on - strand, within Dsui_2462 at 2619.987 kb on - strand, within Dsui_2462 at 2619.995 kb on + strand, within Dsui_2462 at 2620.037 kb on + strand, within Dsui_2462 at 2620.091 kb on - strand, within Dsui_2462 at 2620.116 kb on - strand, within Dsui_2462 at 2620.145 kb on - strand at 2620.248 kb on + strand, within Dsui_2462 at 2620.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 2,617,873 + Dsui_2459 0.55 -0.5 2,617,887 + Dsui_2459 0.59 -1.6 2,618,023 + -0.1 2,618,023 + -0.2 2,618,023 + -0.1 2,618,031 - -1.4 2,618,031 - +0.2 2,618,031 - -0.8 2,618,031 - -1.0 2,619,597 + -0.1 2,619,634 + +0.4 2,619,659 + +0.2 2,619,683 + +0.0 2,619,747 + Dsui_2462 0.14 +0.1 2,619,747 + Dsui_2462 0.14 -0.1 2,619,760 + Dsui_2462 0.16 -0.1 2,619,818 + Dsui_2462 0.24 +0.3 2,619,829 + Dsui_2462 0.26 +0.3 2,619,862 + Dsui_2462 0.31 +0.3 2,619,949 - Dsui_2462 0.43 -1.6 2,619,987 - Dsui_2462 0.48 -1.3 2,619,995 + Dsui_2462 0.49 +0.4 2,620,037 + Dsui_2462 0.55 +0.2 2,620,091 - Dsui_2462 0.63 -1.6 2,620,116 - Dsui_2462 0.66 -0.9 2,620,145 - +0.6 2,620,248 + Dsui_2462 0.85 +0.3 2,620,323 - -0.3
Or see this region's nucleotide sequence