Strain Fitness in Dechlorosoma suillum PS around Dsui_1723

Experiment: Anaero. lactate (C), chlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1722 and Dsui_1723 overlap by 8 nucleotidesDsui_1723 and Dsui_1724 overlap by 4 nucleotides Dsui_1722: Dsui_1722 - flagellar biosynthetic protein FlhB, at 1,812,295 to 1,813,434 _1722 Dsui_1723: Dsui_1723 - flagellar biosynthesis protein FlhA, at 1,813,427 to 1,815,508 _1723 Dsui_1724: Dsui_1724 - flagellar biosynthetic protein FlhF, at 1,815,505 to 1,816,872 _1724 Position (kb) 1813 1814 1815 1816Strain fitness (log2 ratio) -2 -1 0 1 2at 1812.438 kb on - strand, within Dsui_1722at 1812.461 kb on + strand, within Dsui_1722at 1812.500 kb on + strand, within Dsui_1722at 1812.596 kb on + strand, within Dsui_1722at 1812.625 kb on - strand, within Dsui_1722at 1812.664 kb on + strand, within Dsui_1722at 1812.664 kb on + strand, within Dsui_1722at 1812.674 kb on + strand, within Dsui_1722at 1812.723 kb on + strand, within Dsui_1722at 1812.732 kb on + strand, within Dsui_1722at 1812.740 kb on - strand, within Dsui_1722at 1812.767 kb on - strand, within Dsui_1722at 1812.779 kb on + strand, within Dsui_1722at 1812.796 kb on - strand, within Dsui_1722at 1812.843 kb on + strand, within Dsui_1722at 1812.851 kb on - strand, within Dsui_1722at 1812.950 kb on + strand, within Dsui_1722at 1813.019 kb on - strand, within Dsui_1722at 1813.082 kb on - strand, within Dsui_1722at 1813.128 kb on - strand, within Dsui_1722at 1813.240 kb on + strand, within Dsui_1722at 1813.263 kb on - strand, within Dsui_1722at 1813.265 kb on + strand, within Dsui_1722at 1813.294 kb on + strand, within Dsui_1722at 1813.297 kb on - strand, within Dsui_1722at 1813.302 kb on - strand, within Dsui_1722at 1813.307 kb on - strand, within Dsui_1722at 1813.326 kb on - strandat 1813.326 kb on - strandat 1813.380 kb on + strandat 1813.404 kb on + strandat 1813.412 kb on - strandat 1813.496 kb on + strandat 1813.630 kb on - strandat 1813.670 kb on - strand, within Dsui_1723at 1813.757 kb on + strand, within Dsui_1723at 1813.795 kb on + strand, within Dsui_1723at 1813.930 kb on + strand, within Dsui_1723at 1813.930 kb on + strand, within Dsui_1723at 1813.930 kb on + strand, within Dsui_1723at 1814.053 kb on - strand, within Dsui_1723at 1814.074 kb on - strand, within Dsui_1723at 1814.115 kb on + strand, within Dsui_1723at 1814.216 kb on + strand, within Dsui_1723at 1814.306 kb on - strandat 1814.344 kb on + strand, within Dsui_1723at 1814.349 kb on + strand, within Dsui_1723at 1814.418 kb on - strand, within Dsui_1723at 1814.419 kb on + strand, within Dsui_1723at 1814.419 kb on + strand, within Dsui_1723at 1814.419 kb on + strand, within Dsui_1723at 1814.419 kb on + strand, within Dsui_1723at 1814.419 kb on + strand, within Dsui_1723at 1814.427 kb on - strand, within Dsui_1723at 1814.467 kb on - strand, within Dsui_1723at 1814.529 kb on - strand, within Dsui_1723at 1814.550 kb on + strand, within Dsui_1723at 1814.559 kb on - strand, within Dsui_1723at 1814.617 kb on - strand, within Dsui_1723at 1814.638 kb on + strand, within Dsui_1723at 1814.649 kb on + strand, within Dsui_1723at 1814.649 kb on + strand, within Dsui_1723at 1814.657 kb on - strand, within Dsui_1723at 1814.657 kb on - strand, within Dsui_1723at 1814.684 kb on - strand, within Dsui_1723at 1814.691 kb on - strand, within Dsui_1723at 1814.782 kb on - strand, within Dsui_1723at 1814.845 kb on + strand, within Dsui_1723at 1814.906 kb on + strand, within Dsui_1723at 1815.010 kb on + strand, within Dsui_1723at 1815.038 kb on + strand, within Dsui_1723at 1815.046 kb on - strand, within Dsui_1723at 1815.065 kb on + strand, within Dsui_1723at 1815.073 kb on - strand, within Dsui_1723at 1815.137 kb on + strand, within Dsui_1723at 1815.137 kb on + strand, within Dsui_1723at 1815.137 kb on + strand, within Dsui_1723at 1815.142 kb on + strand, within Dsui_1723at 1815.145 kb on - strand, within Dsui_1723at 1815.150 kb on - strand, within Dsui_1723at 1815.152 kb on - strand, within Dsui_1723at 1815.341 kb on + strandat 1815.347 kb on + strandat 1815.430 kb on + strandat 1815.437 kb on - strandat 1815.490 kb on + strandat 1815.552 kb on - strandat 1815.671 kb on + strand, within Dsui_1724at 1815.693 kb on + strand, within Dsui_1724at 1815.719 kb on - strand, within Dsui_1724at 1815.727 kb on - strand, within Dsui_1724at 1815.909 kb on + strand, within Dsui_1724at 1815.951 kb on + strand, within Dsui_1724at 1815.981 kb on + strand, within Dsui_1724at 1815.989 kb on - strand, within Dsui_1724at 1816.003 kb on + strand, within Dsui_1724at 1816.010 kb on - strand, within Dsui_1724at 1816.122 kb on + strand, within Dsui_1724at 1816.252 kb on - strand, within Dsui_1724at 1816.299 kb on + strand, within Dsui_1724at 1816.338 kb on - strand, within Dsui_1724at 1816.375 kb on + strand, within Dsui_1724at 1816.438 kb on - strand, within Dsui_1724

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor
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1,812,438 - Dsui_1722 0.13 +0.3
1,812,461 + Dsui_1722 0.15 -0.7
1,812,500 + Dsui_1722 0.18 +0.1
1,812,596 + Dsui_1722 0.26 +0.1
1,812,625 - Dsui_1722 0.29 -0.4
1,812,664 + Dsui_1722 0.32 -0.3
1,812,664 + Dsui_1722 0.32 -0.9
1,812,674 + Dsui_1722 0.33 -0.5
1,812,723 + Dsui_1722 0.38 +0.3
1,812,732 + Dsui_1722 0.38 +0.3
1,812,740 - Dsui_1722 0.39 -0.1
1,812,767 - Dsui_1722 0.41 -0.5
1,812,779 + Dsui_1722 0.42 -0.2
1,812,796 - Dsui_1722 0.44 -0.9
1,812,843 + Dsui_1722 0.48 -0.5
1,812,851 - Dsui_1722 0.49 +1.0
1,812,950 + Dsui_1722 0.57 -0.3
1,813,019 - Dsui_1722 0.64 -0.1
1,813,082 - Dsui_1722 0.69 +0.8
1,813,128 - Dsui_1722 0.73 -0.2
1,813,240 + Dsui_1722 0.83 -0.6
1,813,263 - Dsui_1722 0.85 -0.8
1,813,265 + Dsui_1722 0.85 -1.2
1,813,294 + Dsui_1722 0.88 -0.7
1,813,297 - Dsui_1722 0.88 -0.6
1,813,302 - Dsui_1722 0.88 -1.5
1,813,307 - Dsui_1722 0.89 -0.2
1,813,326 - -0.8
1,813,326 - -0.1
1,813,380 + +0.0
1,813,404 + -0.5
1,813,412 - -2.4
1,813,496 + +0.1
1,813,630 - -0.9
1,813,670 - Dsui_1723 0.12 +0.0
1,813,757 + Dsui_1723 0.16 -0.3
1,813,795 + Dsui_1723 0.18 -0.4
1,813,930 + Dsui_1723 0.24 -0.4
1,813,930 + Dsui_1723 0.24 -1.3
1,813,930 + Dsui_1723 0.24 -0.5
1,814,053 - Dsui_1723 0.30 -0.2
1,814,074 - Dsui_1723 0.31 -0.2
1,814,115 + Dsui_1723 0.33 +0.2
1,814,216 + Dsui_1723 0.38 -1.3
1,814,306 - +2.0
1,814,344 + Dsui_1723 0.44 -0.9
1,814,349 + Dsui_1723 0.44 +0.1
1,814,418 - Dsui_1723 0.48 +0.1
1,814,419 + Dsui_1723 0.48 -0.2
1,814,419 + Dsui_1723 0.48 -0.3
1,814,419 + Dsui_1723 0.48 -0.2
1,814,419 + Dsui_1723 0.48 -0.1
1,814,419 + Dsui_1723 0.48 -0.8
1,814,427 - Dsui_1723 0.48 -1.1
1,814,467 - Dsui_1723 0.50 -0.3
1,814,529 - Dsui_1723 0.53 -1.8
1,814,550 + Dsui_1723 0.54 -1.2
1,814,559 - Dsui_1723 0.54 -1.5
1,814,617 - Dsui_1723 0.57 -0.3
1,814,638 + Dsui_1723 0.58 -0.2
1,814,649 + Dsui_1723 0.59 -0.9
1,814,649 + Dsui_1723 0.59 -0.3
1,814,657 - Dsui_1723 0.59 -1.0
1,814,657 - Dsui_1723 0.59 -1.6
1,814,684 - Dsui_1723 0.60 -0.4
1,814,691 - Dsui_1723 0.61 -0.5
1,814,782 - Dsui_1723 0.65 +0.6
1,814,845 + Dsui_1723 0.68 -1.0
1,814,906 + Dsui_1723 0.71 -0.8
1,815,010 + Dsui_1723 0.76 +0.2
1,815,038 + Dsui_1723 0.77 +0.0
1,815,046 - Dsui_1723 0.78 +1.0
1,815,065 + Dsui_1723 0.79 +0.1
1,815,073 - Dsui_1723 0.79 -0.4
1,815,137 + Dsui_1723 0.82 +0.4
1,815,137 + Dsui_1723 0.82 +0.1
1,815,137 + Dsui_1723 0.82 -0.6
1,815,142 + Dsui_1723 0.82 +1.0
1,815,145 - Dsui_1723 0.83 -0.4
1,815,150 - Dsui_1723 0.83 -0.1
1,815,152 - Dsui_1723 0.83 +0.7
1,815,341 + -0.2
1,815,347 + -0.8
1,815,430 + -0.7
1,815,437 - -2.2
1,815,490 + -0.3
1,815,552 - -1.1
1,815,671 + Dsui_1724 0.12 -0.3
1,815,693 + Dsui_1724 0.14 -0.0
1,815,719 - Dsui_1724 0.16 +1.2
1,815,727 - Dsui_1724 0.16 -0.7
1,815,909 + Dsui_1724 0.30 -0.6
1,815,951 + Dsui_1724 0.33 -0.5
1,815,981 + Dsui_1724 0.35 -1.0
1,815,989 - Dsui_1724 0.35 -2.3
1,816,003 + Dsui_1724 0.36 -0.1
1,816,010 - Dsui_1724 0.37 -1.4
1,816,122 + Dsui_1724 0.45 -0.5
1,816,252 - Dsui_1724 0.55 -0.6
1,816,299 + Dsui_1724 0.58 -0.7
1,816,338 - Dsui_1724 0.61 -0.2
1,816,375 + Dsui_1724 0.64 -1.0
1,816,438 - Dsui_1724 0.68 -0.7

Or see this region's nucleotide sequence