Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1722 and Dsui_1723 overlap by 8 nucleotides Dsui_1723 and Dsui_1724 overlap by 4 nucleotides
Dsui_1722: Dsui_1722 - flagellar biosynthetic protein FlhB, at 1,812,295 to 1,813,434
_1722
Dsui_1723: Dsui_1723 - flagellar biosynthesis protein FlhA, at 1,813,427 to 1,815,508
_1723
Dsui_1724: Dsui_1724 - flagellar biosynthetic protein FlhF, at 1,815,505 to 1,816,872
_1724
Position (kb)
1813
1814
1815
1816 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1812.438 kb on - strand, within Dsui_1722 at 1812.461 kb on + strand, within Dsui_1722 at 1812.500 kb on + strand, within Dsui_1722 at 1812.596 kb on + strand, within Dsui_1722 at 1812.625 kb on - strand, within Dsui_1722 at 1812.664 kb on + strand, within Dsui_1722 at 1812.664 kb on + strand, within Dsui_1722 at 1812.674 kb on + strand, within Dsui_1722 at 1812.723 kb on + strand, within Dsui_1722 at 1812.732 kb on + strand, within Dsui_1722 at 1812.740 kb on - strand, within Dsui_1722 at 1812.767 kb on - strand, within Dsui_1722 at 1812.779 kb on + strand, within Dsui_1722 at 1812.796 kb on - strand, within Dsui_1722 at 1812.843 kb on + strand, within Dsui_1722 at 1812.851 kb on - strand, within Dsui_1722 at 1812.950 kb on + strand, within Dsui_1722 at 1813.019 kb on - strand, within Dsui_1722 at 1813.082 kb on - strand, within Dsui_1722 at 1813.128 kb on - strand, within Dsui_1722 at 1813.240 kb on + strand, within Dsui_1722 at 1813.263 kb on - strand, within Dsui_1722 at 1813.265 kb on + strand, within Dsui_1722 at 1813.294 kb on + strand, within Dsui_1722 at 1813.297 kb on - strand, within Dsui_1722 at 1813.302 kb on - strand, within Dsui_1722 at 1813.307 kb on - strand, within Dsui_1722 at 1813.326 kb on - strand at 1813.326 kb on - strand at 1813.380 kb on + strand at 1813.404 kb on + strand at 1813.412 kb on - strand at 1813.496 kb on + strand at 1813.630 kb on - strand at 1813.670 kb on - strand, within Dsui_1723 at 1813.757 kb on + strand, within Dsui_1723 at 1813.795 kb on + strand, within Dsui_1723 at 1813.930 kb on + strand, within Dsui_1723 at 1813.930 kb on + strand, within Dsui_1723 at 1813.930 kb on + strand, within Dsui_1723 at 1814.053 kb on - strand, within Dsui_1723 at 1814.074 kb on - strand, within Dsui_1723 at 1814.115 kb on + strand, within Dsui_1723 at 1814.216 kb on + strand, within Dsui_1723 at 1814.306 kb on - strand at 1814.344 kb on + strand, within Dsui_1723 at 1814.349 kb on + strand, within Dsui_1723 at 1814.418 kb on - strand, within Dsui_1723 at 1814.419 kb on + strand, within Dsui_1723 at 1814.419 kb on + strand, within Dsui_1723 at 1814.419 kb on + strand, within Dsui_1723 at 1814.419 kb on + strand, within Dsui_1723 at 1814.419 kb on + strand, within Dsui_1723 at 1814.427 kb on - strand, within Dsui_1723 at 1814.467 kb on - strand, within Dsui_1723 at 1814.529 kb on - strand, within Dsui_1723 at 1814.550 kb on + strand, within Dsui_1723 at 1814.559 kb on - strand, within Dsui_1723 at 1814.617 kb on - strand, within Dsui_1723 at 1814.638 kb on + strand, within Dsui_1723 at 1814.649 kb on + strand, within Dsui_1723 at 1814.649 kb on + strand, within Dsui_1723 at 1814.657 kb on - strand, within Dsui_1723 at 1814.657 kb on - strand, within Dsui_1723 at 1814.684 kb on - strand, within Dsui_1723 at 1814.691 kb on - strand, within Dsui_1723 at 1814.782 kb on - strand, within Dsui_1723 at 1814.845 kb on + strand, within Dsui_1723 at 1814.906 kb on + strand, within Dsui_1723 at 1815.010 kb on + strand, within Dsui_1723 at 1815.038 kb on + strand, within Dsui_1723 at 1815.046 kb on - strand, within Dsui_1723 at 1815.065 kb on + strand, within Dsui_1723 at 1815.073 kb on - strand, within Dsui_1723 at 1815.137 kb on + strand, within Dsui_1723 at 1815.137 kb on + strand, within Dsui_1723 at 1815.137 kb on + strand, within Dsui_1723 at 1815.142 kb on + strand, within Dsui_1723 at 1815.145 kb on - strand, within Dsui_1723 at 1815.150 kb on - strand, within Dsui_1723 at 1815.152 kb on - strand, within Dsui_1723 at 1815.341 kb on + strand at 1815.347 kb on + strand at 1815.430 kb on + strand at 1815.437 kb on - strand at 1815.490 kb on + strand at 1815.552 kb on - strand at 1815.671 kb on + strand, within Dsui_1724 at 1815.693 kb on + strand, within Dsui_1724 at 1815.719 kb on - strand, within Dsui_1724 at 1815.727 kb on - strand, within Dsui_1724 at 1815.909 kb on + strand, within Dsui_1724 at 1815.951 kb on + strand, within Dsui_1724 at 1815.981 kb on + strand, within Dsui_1724 at 1815.989 kb on - strand, within Dsui_1724 at 1816.003 kb on + strand, within Dsui_1724 at 1816.010 kb on - strand, within Dsui_1724 at 1816.122 kb on + strand, within Dsui_1724 at 1816.252 kb on - strand, within Dsui_1724 at 1816.299 kb on + strand, within Dsui_1724 at 1816.338 kb on - strand, within Dsui_1724 at 1816.375 kb on + strand, within Dsui_1724 at 1816.438 kb on - strand, within Dsui_1724
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,812,438 - Dsui_1722 0.13 +0.3 1,812,461 + Dsui_1722 0.15 -0.7 1,812,500 + Dsui_1722 0.18 +0.1 1,812,596 + Dsui_1722 0.26 +0.1 1,812,625 - Dsui_1722 0.29 -0.4 1,812,664 + Dsui_1722 0.32 -0.3 1,812,664 + Dsui_1722 0.32 -0.9 1,812,674 + Dsui_1722 0.33 -0.5 1,812,723 + Dsui_1722 0.38 +0.3 1,812,732 + Dsui_1722 0.38 +0.3 1,812,740 - Dsui_1722 0.39 -0.1 1,812,767 - Dsui_1722 0.41 -0.5 1,812,779 + Dsui_1722 0.42 -0.2 1,812,796 - Dsui_1722 0.44 -0.9 1,812,843 + Dsui_1722 0.48 -0.5 1,812,851 - Dsui_1722 0.49 +1.0 1,812,950 + Dsui_1722 0.57 -0.3 1,813,019 - Dsui_1722 0.64 -0.1 1,813,082 - Dsui_1722 0.69 +0.8 1,813,128 - Dsui_1722 0.73 -0.2 1,813,240 + Dsui_1722 0.83 -0.6 1,813,263 - Dsui_1722 0.85 -0.8 1,813,265 + Dsui_1722 0.85 -1.2 1,813,294 + Dsui_1722 0.88 -0.7 1,813,297 - Dsui_1722 0.88 -0.6 1,813,302 - Dsui_1722 0.88 -1.5 1,813,307 - Dsui_1722 0.89 -0.2 1,813,326 - -0.8 1,813,326 - -0.1 1,813,380 + +0.0 1,813,404 + -0.5 1,813,412 - -2.4 1,813,496 + +0.1 1,813,630 - -0.9 1,813,670 - Dsui_1723 0.12 +0.0 1,813,757 + Dsui_1723 0.16 -0.3 1,813,795 + Dsui_1723 0.18 -0.4 1,813,930 + Dsui_1723 0.24 -0.4 1,813,930 + Dsui_1723 0.24 -1.3 1,813,930 + Dsui_1723 0.24 -0.5 1,814,053 - Dsui_1723 0.30 -0.2 1,814,074 - Dsui_1723 0.31 -0.2 1,814,115 + Dsui_1723 0.33 +0.2 1,814,216 + Dsui_1723 0.38 -1.3 1,814,306 - +2.0 1,814,344 + Dsui_1723 0.44 -0.9 1,814,349 + Dsui_1723 0.44 +0.1 1,814,418 - Dsui_1723 0.48 +0.1 1,814,419 + Dsui_1723 0.48 -0.2 1,814,419 + Dsui_1723 0.48 -0.3 1,814,419 + Dsui_1723 0.48 -0.2 1,814,419 + Dsui_1723 0.48 -0.1 1,814,419 + Dsui_1723 0.48 -0.8 1,814,427 - Dsui_1723 0.48 -1.1 1,814,467 - Dsui_1723 0.50 -0.3 1,814,529 - Dsui_1723 0.53 -1.8 1,814,550 + Dsui_1723 0.54 -1.2 1,814,559 - Dsui_1723 0.54 -1.5 1,814,617 - Dsui_1723 0.57 -0.3 1,814,638 + Dsui_1723 0.58 -0.2 1,814,649 + Dsui_1723 0.59 -0.9 1,814,649 + Dsui_1723 0.59 -0.3 1,814,657 - Dsui_1723 0.59 -1.0 1,814,657 - Dsui_1723 0.59 -1.6 1,814,684 - Dsui_1723 0.60 -0.4 1,814,691 - Dsui_1723 0.61 -0.5 1,814,782 - Dsui_1723 0.65 +0.6 1,814,845 + Dsui_1723 0.68 -1.0 1,814,906 + Dsui_1723 0.71 -0.8 1,815,010 + Dsui_1723 0.76 +0.2 1,815,038 + Dsui_1723 0.77 +0.0 1,815,046 - Dsui_1723 0.78 +1.0 1,815,065 + Dsui_1723 0.79 +0.1 1,815,073 - Dsui_1723 0.79 -0.4 1,815,137 + Dsui_1723 0.82 +0.4 1,815,137 + Dsui_1723 0.82 +0.1 1,815,137 + Dsui_1723 0.82 -0.6 1,815,142 + Dsui_1723 0.82 +1.0 1,815,145 - Dsui_1723 0.83 -0.4 1,815,150 - Dsui_1723 0.83 -0.1 1,815,152 - Dsui_1723 0.83 +0.7 1,815,341 + -0.2 1,815,347 + -0.8 1,815,430 + -0.7 1,815,437 - -2.2 1,815,490 + -0.3 1,815,552 - -1.1 1,815,671 + Dsui_1724 0.12 -0.3 1,815,693 + Dsui_1724 0.14 -0.0 1,815,719 - Dsui_1724 0.16 +1.2 1,815,727 - Dsui_1724 0.16 -0.7 1,815,909 + Dsui_1724 0.30 -0.6 1,815,951 + Dsui_1724 0.33 -0.5 1,815,981 + Dsui_1724 0.35 -1.0 1,815,989 - Dsui_1724 0.35 -2.3 1,816,003 + Dsui_1724 0.36 -0.1 1,816,010 - Dsui_1724 0.37 -1.4 1,816,122 + Dsui_1724 0.45 -0.5 1,816,252 - Dsui_1724 0.55 -0.6 1,816,299 + Dsui_1724 0.58 -0.7 1,816,338 - Dsui_1724 0.61 -0.2 1,816,375 + Dsui_1724 0.64 -1.0 1,816,438 - Dsui_1724 0.68 -0.7
Or see this region's nucleotide sequence