Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1156 and Dsui_1157 are separated by 339 nucleotides Dsui_1157 and Dsui_1158 are separated by 86 nucleotides Dsui_1158 and Dsui_1159 are separated by 14 nucleotides
Dsui_1156: Dsui_1156 - putative divalent heavy-metal cations transporter, at 1,212,405 to 1,213,310
_1156
Dsui_1157: Dsui_1157 - hypothetical protein, at 1,213,650 to 1,213,883
_1157
Dsui_1158: Dsui_1158 - hydrogenase expression/formation protein HypE, at 1,213,970 to 1,215,016
_1158
Dsui_1159: Dsui_1159 - hydrogenase expression/formation protein HypD, at 1,215,031 to 1,216,161
_1159
Position (kb)
1213
1214
1215
1216 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1212.971 kb on - strand, within Dsui_1156 at 1213.320 kb on - strand at 1213.325 kb on - strand at 1213.336 kb on + strand at 1213.336 kb on + strand at 1213.432 kb on - strand at 1213.432 kb on - strand at 1213.438 kb on - strand at 1213.438 kb on - strand at 1213.491 kb on - strand at 1213.557 kb on + strand at 1213.565 kb on - strand at 1213.633 kb on + strand at 1213.638 kb on - strand at 1213.653 kb on - strand at 1213.664 kb on - strand at 1213.671 kb on + strand at 1213.701 kb on - strand, within Dsui_1157 at 1213.805 kb on + strand, within Dsui_1157 at 1213.813 kb on - strand, within Dsui_1157 at 1214.062 kb on - strand at 1214.156 kb on + strand, within Dsui_1158 at 1214.183 kb on + strand, within Dsui_1158 at 1214.183 kb on + strand at 1214.306 kb on - strand, within Dsui_1158 at 1214.308 kb on + strand, within Dsui_1158 at 1214.352 kb on - strand, within Dsui_1158 at 1214.357 kb on - strand, within Dsui_1158 at 1214.357 kb on - strand, within Dsui_1158 at 1214.571 kb on + strand, within Dsui_1158 at 1214.571 kb on + strand, within Dsui_1158 at 1214.571 kb on + strand, within Dsui_1158 at 1214.571 kb on + strand, within Dsui_1158 at 1214.579 kb on - strand, within Dsui_1158 at 1214.579 kb on - strand, within Dsui_1158 at 1214.579 kb on - strand, within Dsui_1158 at 1214.683 kb on - strand, within Dsui_1158 at 1214.855 kb on + strand, within Dsui_1158 at 1214.863 kb on - strand, within Dsui_1158 at 1214.960 kb on + strand at 1214.986 kb on + strand at 1215.042 kb on - strand at 1215.099 kb on + strand at 1215.134 kb on + strand at 1215.142 kb on - strand at 1215.177 kb on + strand, within Dsui_1159 at 1215.190 kb on - strand, within Dsui_1159 at 1215.279 kb on + strand, within Dsui_1159 at 1215.313 kb on + strand, within Dsui_1159 at 1215.380 kb on - strand, within Dsui_1159 at 1215.497 kb on - strand, within Dsui_1159 at 1215.550 kb on + strand, within Dsui_1159 at 1215.653 kb on - strand, within Dsui_1159 at 1215.680 kb on + strand at 1215.694 kb on - strand, within Dsui_1159 at 1215.802 kb on + strand at 1215.810 kb on - strand, within Dsui_1159 at 1215.881 kb on - strand, within Dsui_1159 at 1215.900 kb on + strand, within Dsui_1159 at 1215.901 kb on - strand, within Dsui_1159
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,212,971 - Dsui_1156 0.62 +0.9 1,213,320 - +1.1 1,213,325 - +0.6 1,213,336 + +0.3 1,213,336 + -0.1 1,213,432 - +0.9 1,213,432 - +2.4 1,213,438 - +2.0 1,213,438 - +0.6 1,213,491 - +1.4 1,213,557 + +0.2 1,213,565 - +0.9 1,213,633 + -4.6 1,213,638 - +0.2 1,213,653 - +1.4 1,213,664 - +0.4 1,213,671 + +0.6 1,213,701 - Dsui_1157 0.22 +0.0 1,213,805 + Dsui_1157 0.66 -0.3 1,213,813 - Dsui_1157 0.70 -1.7 1,214,062 - +0.5 1,214,156 + Dsui_1158 0.18 +1.4 1,214,183 + Dsui_1158 0.20 +1.0 1,214,183 + +0.4 1,214,306 - Dsui_1158 0.32 +0.4 1,214,308 + Dsui_1158 0.32 +0.8 1,214,352 - Dsui_1158 0.36 +0.8 1,214,357 - Dsui_1158 0.37 +1.4 1,214,357 - Dsui_1158 0.37 -0.0 1,214,571 + Dsui_1158 0.57 +0.2 1,214,571 + Dsui_1158 0.57 +1.0 1,214,571 + Dsui_1158 0.57 +1.0 1,214,571 + Dsui_1158 0.57 +1.0 1,214,579 - Dsui_1158 0.58 +0.5 1,214,579 - Dsui_1158 0.58 +0.4 1,214,579 - Dsui_1158 0.58 +0.9 1,214,683 - Dsui_1158 0.68 +0.1 1,214,855 + Dsui_1158 0.85 +0.6 1,214,863 - Dsui_1158 0.85 +0.2 1,214,960 + +1.4 1,214,986 + +0.5 1,215,042 - +0.3 1,215,099 + +0.6 1,215,134 + +0.3 1,215,142 - -0.3 1,215,177 + Dsui_1159 0.13 +0.2 1,215,190 - Dsui_1159 0.14 +1.4 1,215,279 + Dsui_1159 0.22 +0.5 1,215,313 + Dsui_1159 0.25 +0.9 1,215,380 - Dsui_1159 0.31 +0.4 1,215,497 - Dsui_1159 0.41 +0.5 1,215,550 + Dsui_1159 0.46 +0.5 1,215,653 - Dsui_1159 0.55 +1.0 1,215,680 + +0.4 1,215,694 - Dsui_1159 0.59 +0.7 1,215,802 + -0.6 1,215,810 - Dsui_1159 0.69 -0.4 1,215,881 - Dsui_1159 0.75 +0.7 1,215,900 + Dsui_1159 0.77 +1.2 1,215,901 - Dsui_1159 0.77 +0.6
Or see this region's nucleotide sequence