Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0980 and Dsui_0981 are separated by 20 nucleotides Dsui_0981 and Dsui_0982 are separated by 63 nucleotides Dsui_0982 and Dsui_0983 are separated by 188 nucleotides
Dsui_0980: Dsui_0980 - acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta), at 1,006,300 to 1,007,907
_0980
Dsui_0981: Dsui_0981 - enoyl-CoA hydratase/carnithine racemase, at 1,007,928 to 1,008,719
_0981
Dsui_0982: Dsui_0982 - acetyl/propionyl-CoA carboxylase, alpha subunit, at 1,008,783 to 1,010,786
_0982
Dsui_0983: Dsui_0983 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 1,010,975 to 1,013,275
_0983
Position (kb)
1008
1009
1010
1011 Strain fitness (log2 ratio)
-1
0
1
2 at 1007.790 kb on + strand at 1008.053 kb on + strand, within Dsui_0981 at 1008.084 kb on - strand, within Dsui_0981 at 1008.613 kb on + strand, within Dsui_0981 at 1008.637 kb on - strand, within Dsui_0981 at 1008.927 kb on + strand at 1009.031 kb on - strand, within Dsui_0982 at 1009.295 kb on + strand at 1009.318 kb on - strand at 1009.385 kb on + strand, within Dsui_0982 at 1009.476 kb on - strand, within Dsui_0982 at 1009.486 kb on + strand, within Dsui_0982 at 1009.646 kb on + strand, within Dsui_0982 at 1009.703 kb on - strand at 1009.704 kb on - strand, within Dsui_0982 at 1009.777 kb on + strand, within Dsui_0982 at 1009.804 kb on - strand, within Dsui_0982 at 1009.873 kb on + strand, within Dsui_0982 at 1009.929 kb on - strand, within Dsui_0982 at 1009.978 kb on - strand, within Dsui_0982 at 1010.003 kb on - strand, within Dsui_0982 at 1010.083 kb on + strand, within Dsui_0982 at 1010.390 kb on + strand, within Dsui_0982 at 1010.537 kb on - strand, within Dsui_0982 at 1010.615 kb on + strand at 1010.686 kb on + strand at 1010.754 kb on - strand at 1010.780 kb on + strand at 1010.863 kb on + strand at 1010.876 kb on - strand at 1011.031 kb on + strand at 1011.114 kb on + strand at 1011.132 kb on + strand at 1011.132 kb on + strand at 1011.369 kb on - strand, within Dsui_0983 at 1011.385 kb on + strand, within Dsui_0983 at 1011.488 kb on - strand, within Dsui_0983 at 1011.507 kb on + strand, within Dsui_0983 at 1011.517 kb on + strand, within Dsui_0983 at 1011.635 kb on - strand, within Dsui_0983 at 1011.642 kb on + strand, within Dsui_0983 at 1011.706 kb on + strand, within Dsui_0983 at 1011.767 kb on - strand, within Dsui_0983
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 1,007,790 + -0.0 1,008,053 + Dsui_0981 0.16 +0.1 1,008,084 - Dsui_0981 0.20 -1.1 1,008,613 + Dsui_0981 0.86 +0.2 1,008,637 - Dsui_0981 0.90 -0.9 1,008,927 + +2.4 1,009,031 - Dsui_0982 0.12 -0.1 1,009,295 + +0.7 1,009,318 - +0.8 1,009,385 + Dsui_0982 0.30 +1.4 1,009,476 - Dsui_0982 0.35 +2.5 1,009,486 + Dsui_0982 0.35 +0.9 1,009,646 + Dsui_0982 0.43 +0.9 1,009,703 - +0.4 1,009,704 - Dsui_0982 0.46 +0.1 1,009,777 + Dsui_0982 0.50 +0.2 1,009,804 - Dsui_0982 0.51 +0.2 1,009,873 + Dsui_0982 0.54 -0.2 1,009,929 - Dsui_0982 0.57 -0.1 1,009,978 - Dsui_0982 0.60 +0.4 1,010,003 - Dsui_0982 0.61 +0.6 1,010,083 + Dsui_0982 0.65 -1.0 1,010,390 + Dsui_0982 0.80 +0.2 1,010,537 - Dsui_0982 0.88 -0.3 1,010,615 + +0.8 1,010,686 + +0.4 1,010,754 - -0.3 1,010,780 + -0.9 1,010,863 + +0.6 1,010,876 - +0.4 1,011,031 + +0.0 1,011,114 + -0.6 1,011,132 + -0.0 1,011,132 + -1.6 1,011,369 - Dsui_0983 0.17 +0.4 1,011,385 + Dsui_0983 0.18 +1.2 1,011,488 - Dsui_0983 0.22 -1.2 1,011,507 + Dsui_0983 0.23 +0.3 1,011,517 + Dsui_0983 0.24 +1.1 1,011,635 - Dsui_0983 0.29 +0.8 1,011,642 + Dsui_0983 0.29 -0.4 1,011,706 + Dsui_0983 0.32 -0.6 1,011,767 - Dsui_0983 0.34 +0.0
Or see this region's nucleotide sequence