Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0525 and Dsui_0527 are separated by 288 nucleotides Dsui_0527 and Dsui_0528 overlap by 4 nucleotides Dsui_0528 and Dsui_0529 are separated by 485 nucleotides
Dsui_0525: Dsui_0525 - hypothetical protein, at 532,198 to 532,668
_0525
Dsui_0527: Dsui_0527 - hypothetical protein, at 532,957 to 533,286
_0527
Dsui_0528: Dsui_0528 - hypothetical protein, at 533,283 to 533,486
_0528
Dsui_0529: Dsui_0529 - outer membrane cobalamin receptor protein, at 533,972 to 535,936
_0529
Position (kb) 533
534 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 532.298 kb on + strand, within Dsui_0525 at 532.312 kb on + strand, within Dsui_0525 at 532.371 kb on + strand, within Dsui_0525 at 532.371 kb on + strand, within Dsui_0525 at 532.429 kb on + strand, within Dsui_0525 at 532.453 kb on + strand, within Dsui_0525 at 532.646 kb on + strand at 532.658 kb on + strand at 532.678 kb on - strand at 532.686 kb on - strand at 532.736 kb on + strand at 532.844 kb on + strand at 532.978 kb on + strand at 533.028 kb on + strand, within Dsui_0527 at 533.068 kb on + strand, within Dsui_0527 at 533.068 kb on + strand, within Dsui_0527 at 533.147 kb on + strand, within Dsui_0527 at 533.152 kb on + strand, within Dsui_0527 at 533.155 kb on - strand, within Dsui_0527 at 533.307 kb on - strand, within Dsui_0528 at 533.489 kb on - strand at 533.520 kb on + strand at 533.526 kb on + strand at 533.526 kb on - strand at 533.534 kb on - strand at 533.724 kb on - strand at 533.738 kb on + strand at 533.855 kb on + strand at 533.962 kb on + strand at 533.970 kb on - strand at 533.977 kb on - strand at 534.008 kb on + strand at 534.260 kb on - strand at 534.279 kb on + strand, within Dsui_0529 at 534.336 kb on + strand, within Dsui_0529 at 534.367 kb on + strand, within Dsui_0529
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 532,298 + Dsui_0525 0.21 +0.4 532,312 + Dsui_0525 0.24 +0.0 532,371 + Dsui_0525 0.37 -0.7 532,371 + Dsui_0525 0.37 +0.7 532,429 + Dsui_0525 0.49 +0.0 532,453 + Dsui_0525 0.54 +0.2 532,646 + -1.9 532,658 + +0.8 532,678 - +0.4 532,686 - -0.2 532,736 + -0.7 532,844 + -1.6 532,978 + -1.7 533,028 + Dsui_0527 0.22 -0.2 533,068 + Dsui_0527 0.34 -3.0 533,068 + Dsui_0527 0.34 -2.2 533,147 + Dsui_0527 0.58 -0.4 533,152 + Dsui_0527 0.59 -0.8 533,155 - Dsui_0527 0.60 -1.4 533,307 - Dsui_0528 0.12 -0.4 533,489 - -0.1 533,520 + -0.4 533,526 + -0.0 533,526 - -1.5 533,534 - -0.2 533,724 - +0.2 533,738 + -0.9 533,855 + +0.1 533,962 + -0.1 533,970 - -0.0 533,977 - -2.6 534,008 + -0.3 534,260 - +0.7 534,279 + Dsui_0529 0.16 +0.2 534,336 + Dsui_0529 0.19 -1.4 534,367 + Dsui_0529 0.20 +0.2
Or see this region's nucleotide sequence