Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0298 and Dsui_0299 are separated by 84 nucleotides Dsui_0299 and Dsui_0300 are separated by 4 nucleotides
Dsui_0298: Dsui_0298 - Kef-type K+ ransport system, predicted NAD-binding component, at 299,543 to 300,421
_0298
Dsui_0299: Dsui_0299 - acetyltransferase, at 300,506 to 300,991
_0299
Dsui_0300: Dsui_0300 - response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 300,996 to 302,621
_0300
Position (kb) 300
301 Strain fitness (log2 ratio) -2
-1
0
1
2 at 299.554 kb on - strand at 299.715 kb on - strand, within Dsui_0298 at 299.772 kb on + strand, within Dsui_0298 at 299.796 kb on - strand, within Dsui_0298 at 299.890 kb on - strand, within Dsui_0298 at 299.896 kb on - strand, within Dsui_0298 at 299.960 kb on - strand, within Dsui_0298 at 299.980 kb on + strand at 299.999 kb on - strand, within Dsui_0298 at 300.001 kb on + strand, within Dsui_0298 at 300.001 kb on + strand, within Dsui_0298 at 300.027 kb on - strand, within Dsui_0298 at 300.098 kb on - strand, within Dsui_0298 at 300.149 kb on + strand, within Dsui_0298 at 300.149 kb on + strand at 300.152 kb on - strand, within Dsui_0298 at 300.174 kb on + strand at 300.182 kb on - strand, within Dsui_0298 at 300.237 kb on - strand, within Dsui_0298 at 300.243 kb on - strand, within Dsui_0298 at 300.272 kb on + strand, within Dsui_0298 at 300.525 kb on + strand at 300.533 kb on - strand at 300.564 kb on - strand, within Dsui_0299 at 300.616 kb on + strand at 300.616 kb on + strand at 300.663 kb on + strand at 300.671 kb on - strand, within Dsui_0299 at 300.671 kb on - strand, within Dsui_0299 at 300.677 kb on + strand at 300.734 kb on + strand, within Dsui_0299 at 300.800 kb on - strand, within Dsui_0299 at 300.812 kb on - strand, within Dsui_0299 at 300.933 kb on - strand, within Dsui_0299 at 300.961 kb on + strand at 301.046 kb on - strand at 301.124 kb on + strand at 301.132 kb on - strand at 301.132 kb on - strand at 301.241 kb on + strand, within Dsui_0300 at 301.285 kb on + strand, within Dsui_0300 at 301.303 kb on - strand, within Dsui_0300 at 301.353 kb on - strand, within Dsui_0300 at 301.374 kb on + strand, within Dsui_0300 at 301.387 kb on + strand, within Dsui_0300 at 301.548 kb on + strand, within Dsui_0300 at 301.576 kb on + strand, within Dsui_0300 at 301.582 kb on + strand, within Dsui_0300 at 301.590 kb on - strand, within Dsui_0300 at 301.590 kb on - strand, within Dsui_0300 at 301.597 kb on + strand, within Dsui_0300 at 301.616 kb on + strand, within Dsui_0300 at 301.698 kb on + strand, within Dsui_0300 at 301.706 kb on - strand, within Dsui_0300 at 301.787 kb on - strand, within Dsui_0300 at 301.896 kb on + strand, within Dsui_0300 at 301.903 kb on + strand, within Dsui_0300 at 301.923 kb on - strand, within Dsui_0300 at 301.935 kb on + strand, within Dsui_0300 at 301.956 kb on - strand, within Dsui_0300 at 301.987 kb on - strand, within Dsui_0300
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 299,554 - -0.4 299,715 - Dsui_0298 0.20 +0.5 299,772 + Dsui_0298 0.26 -1.7 299,796 - Dsui_0298 0.29 -0.4 299,890 - Dsui_0298 0.39 -0.8 299,896 - Dsui_0298 0.40 +0.2 299,960 - Dsui_0298 0.47 -0.3 299,980 + +0.5 299,999 - Dsui_0298 0.52 -0.4 300,001 + Dsui_0298 0.52 -0.1 300,001 + Dsui_0298 0.52 -2.1 300,027 - Dsui_0298 0.55 +0.1 300,098 - Dsui_0298 0.63 +0.4 300,149 + Dsui_0298 0.69 +0.5 300,149 + +0.9 300,152 - Dsui_0298 0.69 +0.6 300,174 + +1.5 300,182 - Dsui_0298 0.73 +0.5 300,237 - Dsui_0298 0.79 +0.5 300,243 - Dsui_0298 0.80 +0.5 300,272 + Dsui_0298 0.83 +1.5 300,525 + +0.6 300,533 - +0.7 300,564 - Dsui_0299 0.12 -0.2 300,616 + +1.5 300,616 + +2.5 300,663 + +0.5 300,671 - Dsui_0299 0.34 +0.3 300,671 - Dsui_0299 0.34 +0.5 300,677 + -1.1 300,734 + Dsui_0299 0.47 +0.6 300,800 - Dsui_0299 0.60 +2.2 300,812 - Dsui_0299 0.63 -0.0 300,933 - Dsui_0299 0.88 +1.0 300,961 + +0.1 301,046 - -0.7 301,124 + -1.9 301,132 - -0.3 301,132 - +0.0 301,241 + Dsui_0300 0.15 -0.3 301,285 + Dsui_0300 0.18 -0.0 301,303 - Dsui_0300 0.19 +0.3 301,353 - Dsui_0300 0.22 +0.6 301,374 + Dsui_0300 0.23 +0.4 301,387 + Dsui_0300 0.24 +0.3 301,548 + Dsui_0300 0.34 -0.2 301,576 + Dsui_0300 0.36 -0.3 301,582 + Dsui_0300 0.36 +0.2 301,590 - Dsui_0300 0.37 +1.3 301,590 - Dsui_0300 0.37 +1.1 301,597 + Dsui_0300 0.37 +0.6 301,616 + Dsui_0300 0.38 -0.6 301,698 + Dsui_0300 0.43 +0.9 301,706 - Dsui_0300 0.44 +0.6 301,787 - Dsui_0300 0.49 +0.9 301,896 + Dsui_0300 0.55 -0.1 301,903 + Dsui_0300 0.56 +0.1 301,923 - Dsui_0300 0.57 -0.3 301,935 + Dsui_0300 0.58 +0.2 301,956 - Dsui_0300 0.59 +0.3 301,987 - Dsui_0300 0.61 -1.4
Or see this region's nucleotide sequence