Experiment: Anaero. lactate (C), chlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0033 and Dsui_0034 are separated by 93 nucleotides Dsui_0034 and Dsui_0035 are separated by 267 nucleotides
Dsui_0033: Dsui_0033 - Zn-dependent protease with chaperone function, at 29,186 to 30,007
_0033
Dsui_0034: Dsui_0034 - flagellar capping protein, at 30,101 to 31,537
_0034
Dsui_0035: Dsui_0035 - ankyrin repeat-containing protein, at 31,805 to 32,854
_0035
Position (kb) 30
31
32 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 29.107 kb on - strand at 29.107 kb on - strand at 29.157 kb on - strand at 29.280 kb on - strand at 29.299 kb on + strand, within Dsui_0033 at 29.458 kb on + strand, within Dsui_0033 at 29.507 kb on - strand at 29.600 kb on + strand, within Dsui_0033 at 29.718 kb on + strand, within Dsui_0033 at 29.864 kb on + strand, within Dsui_0033 at 29.951 kb on - strand at 30.106 kb on - strand at 30.123 kb on + strand at 30.172 kb on + strand at 30.175 kb on - strand at 30.219 kb on - strand at 30.277 kb on - strand, within Dsui_0034 at 30.316 kb on - strand, within Dsui_0034 at 30.327 kb on - strand at 30.409 kb on - strand, within Dsui_0034 at 30.481 kb on - strand, within Dsui_0034 at 30.800 kb on + strand, within Dsui_0034 at 30.808 kb on - strand, within Dsui_0034 at 30.947 kb on + strand, within Dsui_0034 at 30.968 kb on + strand, within Dsui_0034 at 31.022 kb on - strand, within Dsui_0034 at 31.104 kb on - strand, within Dsui_0034 at 31.157 kb on + strand, within Dsui_0034 at 31.215 kb on - strand, within Dsui_0034 at 31.328 kb on + strand at 31.391 kb on + strand at 31.399 kb on - strand at 31.417 kb on + strand at 31.484 kb on - strand at 31.549 kb on + strand at 31.569 kb on + strand at 31.604 kb on - strand at 31.622 kb on + strand at 31.630 kb on - strand at 31.827 kb on + strand at 31.835 kb on - strand at 31.883 kb on - strand at 32.118 kb on - strand, within Dsui_0035 at 32.129 kb on - strand, within Dsui_0035 at 32.187 kb on - strand, within Dsui_0035 at 32.206 kb on + strand, within Dsui_0035 at 32.207 kb on + strand at 32.210 kb on - strand, within Dsui_0035 at 32.210 kb on - strand, within Dsui_0035 at 32.215 kb on - strand at 32.215 kb on - strand, within Dsui_0035 at 32.215 kb on - strand, within Dsui_0035 at 32.230 kb on - strand, within Dsui_0035 at 32.280 kb on - strand, within Dsui_0035 at 32.282 kb on + strand, within Dsui_0035 at 32.332 kb on - strand, within Dsui_0035 at 32.433 kb on + strand at 32.477 kb on + strand at 32.486 kb on + strand, within Dsui_0035
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor remove 29,107 - +0.8 29,107 - -0.1 29,157 - -0.1 29,280 - -0.8 29,299 + Dsui_0033 0.14 +0.8 29,458 + Dsui_0033 0.33 +0.6 29,507 - +2.5 29,600 + Dsui_0033 0.50 +0.1 29,718 + Dsui_0033 0.65 +0.5 29,864 + Dsui_0033 0.82 -0.3 29,951 - +0.1 30,106 - +0.9 30,123 + -3.0 30,172 + +0.8 30,175 - -0.4 30,219 - +0.1 30,277 - Dsui_0034 0.12 +0.1 30,316 - Dsui_0034 0.15 +0.5 30,327 - +0.2 30,409 - Dsui_0034 0.21 -0.1 30,481 - Dsui_0034 0.26 +1.5 30,800 + Dsui_0034 0.49 +0.4 30,808 - Dsui_0034 0.49 +0.6 30,947 + Dsui_0034 0.59 +0.7 30,968 + Dsui_0034 0.60 +0.5 31,022 - Dsui_0034 0.64 -0.4 31,104 - Dsui_0034 0.70 +1.4 31,157 + Dsui_0034 0.73 -0.0 31,215 - Dsui_0034 0.78 +0.4 31,328 + +1.9 31,391 + -0.5 31,399 - +0.2 31,417 + -0.3 31,484 - -1.7 31,549 + -0.6 31,569 + -0.1 31,604 - +0.9 31,622 + -0.1 31,630 - -0.8 31,827 + +0.5 31,835 - +0.5 31,883 - +0.8 32,118 - Dsui_0035 0.30 +1.5 32,129 - Dsui_0035 0.31 -0.7 32,187 - Dsui_0035 0.36 +2.3 32,206 + Dsui_0035 0.38 +1.5 32,207 + +0.5 32,210 - Dsui_0035 0.39 -0.7 32,210 - Dsui_0035 0.39 +0.4 32,215 - +0.5 32,215 - Dsui_0035 0.39 +0.3 32,215 - Dsui_0035 0.39 -0.1 32,230 - Dsui_0035 0.40 +0.1 32,280 - Dsui_0035 0.45 -0.1 32,282 + Dsui_0035 0.45 -0.5 32,332 - Dsui_0035 0.50 +0.4 32,433 + -0.1 32,477 + +1.5 32,486 + Dsui_0035 0.65 +0.7
Or see this region's nucleotide sequence