Strain Fitness in Shewanella amazonensis SB2B around Sama_3568

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
4,201,655	-				+0.1
4,201,673	-				-0.1
4,201,673	-				-1.1
4,201,749	+				+1.3
4,201,773	-				-0.5
4,201,805	+				-0.5
4,201,805	+				-1.1
4,201,806	-				+1.2
4,201,820	-				-1.5
4,201,872	+				-1.7
4,201,895	+				-0.4
4,201,896	-				+2.1
4,201,900	-				+0.3
4,201,904	+				+1.9
4,201,905	-				-1.0
4,201,905	-				-0.6
4,201,926	-				+0.3
4,201,935	+				+0.8
4,201,936	-				-0.4
4,201,936	-				+0.2
4,201,937	+				-0.4
4,201,938	-				+1.1
4,201,938	-				-1.0
4,201,952	-				+0.1
4,201,963	-				-0.5
4,202,004	+				+0.2
4,202,004	+				+0.5
4,202,193	+				-0.7
4,202,323	+		Sama_3567	0.21	-1.2
4,202,324	-		Sama_3567	0.21	+0.1
4,202,324	-		Sama_3567	0.21	-0.1
4,202,328	-		Sama_3567	0.23	+0.6
4,202,328	-		Sama_3567	0.23	+0.5
4,202,328	-		Sama_3567	0.23	+0.6
4,202,360	+		Sama_3567	0.33	-0.9
4,202,360	+		Sama_3567	0.33	+0.1
4,202,360	+		Sama_3567	0.33	-0.0
4,202,373	-		Sama_3567	0.38	+0.6
4,202,373	-		Sama_3567	0.38	+0.4
4,202,395	+		Sama_3567	0.45	-1.7
4,202,395	+		Sama_3567	0.45	-0.3
4,202,396	-		Sama_3567	0.45	-0.5
4,202,453	+		Sama_3567	0.64	+0.3
4,202,485	+		Sama_3567	0.75	+0.5
4,202,485	+		Sama_3567	0.75	+0.6
4,202,486	-		Sama_3567	0.75	+1.6
4,202,487	+		Sama_3567	0.75	-0.0
4,202,487	+		Sama_3567	0.75	+0.8
4,202,488	-		Sama_3567	0.76	+0.6
4,202,488	-		Sama_3567	0.76	-0.9
4,202,488	-		Sama_3567	0.76	+0.1
4,202,508	+		Sama_3567	0.82	+1.8
4,202,508	+		Sama_3567	0.82	-0.5
4,202,508	+		Sama_3567	0.82	+0.1
4,202,508	+		Sama_3567	0.82	+0.1
4,202,509	-		Sama_3567	0.83	+0.5
4,202,509	-		Sama_3567	0.83	+0.2
4,202,509	-		Sama_3567	0.83	+0.2
4,202,509	-		Sama_3567	0.83	+0.1
4,202,526	+		Sama_3567	0.88	+0.1
4,202,526	+		Sama_3567	0.88	-0.5
4,202,527	-		Sama_3567	0.88	-1.2
4,202,527	-		Sama_3567	0.88	-0.2
4,202,527	-		Sama_3567	0.88	+0.7
4,202,527	-		Sama_3567	0.88	-1.1
4,202,529	+		Sama_3567	0.89	-0.5
4,202,529	+		Sama_3567	0.89	+0.6
4,202,529	+		Sama_3567	0.89	-0.7
4,202,530	-		Sama_3567	0.89	+0.5
4,202,530	-		Sama_3567	0.89	-0.5
4,202,530	-		Sama_3567	0.89	+0.5
4,202,530	-		Sama_3567	0.89	+1.9
4,202,550	-				-0.5
4,202,550	-				+0.6
4,202,582	+				-0.7
4,202,583	-				+0.8
4,202,595	+				+1.3
4,202,610	+				-0.2
4,202,610	+				+0.2
4,202,610	+				+0.1
4,202,611	-				+0.9
4,202,611	-				+0.7
4,202,611	-				-1.2
4,202,611	-				-0.2
4,202,626	+				-0.5
4,202,627	-				-0.3
4,202,627	-				-0.2
4,202,627	-				+0.3
4,202,627	-				-0.1
4,202,645	+				+1.1
4,202,646	-				+0.1
4,202,646	-				-0.9
4,202,646	-				+0.2
4,202,692	+				-0.1
4,202,692	+				+0.7
4,202,765	-		Sama_3568	0.16	+0.4
4,202,765	-		Sama_3568	0.16	-1.0
4,202,777	+		Sama_3568	0.18	+0.4
4,202,778	-		Sama_3568	0.18	+0.9
4,202,778	-		Sama_3568	0.18	-0.7
4,202,860	+		Sama_3568	0.29	-0.2
4,202,860	+		Sama_3568	0.29	+0.8
4,202,860	+		Sama_3568	0.29	-0.3
4,202,860	+		Sama_3568	0.29	+0.2
4,202,860	+		Sama_3568	0.29	+1.3
4,202,860	+		Sama_3568	0.29	-0.9
4,202,860	+		Sama_3568	0.29	-1.3
4,202,860	+		Sama_3568	0.29	-0.2
4,202,861	-		Sama_3568	0.29	-2.1
4,202,861	-		Sama_3568	0.29	+0.4
4,202,861	-		Sama_3568	0.29	+0.5
4,202,861	-		Sama_3568	0.29	+0.2
4,202,861	-		Sama_3568	0.29	-0.6
4,202,861	-		Sama_3568	0.29	-0.7
4,202,861	-		Sama_3568	0.29	+1.4
4,202,861	-		Sama_3568	0.29	+0.4
4,202,861	-		Sama_3568	0.29	-0.4
4,202,861	-		Sama_3568	0.29	-1.1
4,202,861	-		Sama_3568	0.29	-0.2
4,202,862	+		Sama_3568	0.29	-0.5
4,202,863	-		Sama_3568	0.29	+2.1
4,202,863	-		Sama_3568	0.29	-0.7
4,202,863	-		Sama_3568	0.29	-1.0
4,202,870	+		Sama_3568	0.30	+0.1
4,202,870	+		Sama_3568	0.30	+0.2
4,202,870	+		Sama_3568	0.30	-0.5
4,202,870	+		Sama_3568	0.30	-0.5
4,202,870	+		Sama_3568	0.30	-1.0
4,202,870	+		Sama_3568	0.30	+0.1
4,202,870	+		Sama_3568	0.30	+0.1
4,202,870	+		Sama_3568	0.30	-0.5
4,202,870	+		Sama_3568	0.30	-0.1
4,202,870	+		Sama_3568	0.30	+0.3
4,202,870	+		Sama_3568	0.30	+0.9
4,202,870	+		Sama_3568	0.30	-0.7
4,202,870	+		Sama_3568	0.30	-1.3
4,202,870	+		Sama_3568	0.30	-0.5
4,202,870	+		Sama_3568	0.30	+0.6
4,202,871	-		Sama_3568	0.30	-0.6
4,202,871	-		Sama_3568	0.30	+0.6
4,202,871	-		Sama_3568	0.30	-1.1
4,202,871	-		Sama_3568	0.30	+0.6
4,202,871	-		Sama_3568	0.30	+0.1
4,202,871	-		Sama_3568	0.30	+0.1
4,202,871	-		Sama_3568	0.30	+1.3
4,202,871	-		Sama_3568	0.30	+0.3
4,202,871	-		Sama_3568	0.30	+0.1
4,202,871	-		Sama_3568	0.30	-0.1
4,202,871	-		Sama_3568	0.30	-0.4
4,202,871	-		Sama_3568	0.30	-0.6
4,202,871	-		Sama_3568	0.30	-1.3
4,202,994	-		Sama_3568	0.47	-1.9
4,203,004	+		Sama_3568	0.48	-0.1
4,203,005	-		Sama_3568	0.48	+0.6
4,203,011	+		Sama_3568	0.49	+0.6
4,203,011	+		Sama_3568	0.49	-0.5
4,203,011	+		Sama_3568	0.49	+1.4
4,203,011	+		Sama_3568	0.49	+1.1
4,203,012	-		Sama_3568	0.49	+1.0
4,203,012	-		Sama_3568	0.49	-0.4
4,203,040	+		Sama_3568	0.53	+0.5
4,203,040	+		Sama_3568	0.53	-0.6
4,203,041	-		Sama_3568	0.53	-1.0
4,203,041	-		Sama_3568	0.53	-1.0
4,203,121	+		Sama_3568	0.64	-0.0
4,203,121	+		Sama_3568	0.64	-1.5
4,203,121	+		Sama_3568	0.64	-0.2
4,203,121	+		Sama_3568	0.64	-0.3
4,203,121	+		Sama_3568	0.64	+0.3
4,203,122	-		Sama_3568	0.64	-0.1
4,203,122	-		Sama_3568	0.64	-1.0
4,203,122	-		Sama_3568	0.64	+0.1
4,203,122	-		Sama_3568	0.64	-0.2
4,203,122	-		Sama_3568	0.64	-0.2
4,203,122	-		Sama_3568	0.64	-0.3
4,203,122	-		Sama_3568	0.64	+1.1
4,203,122	-		Sama_3568	0.64	+0.3
4,203,122	-		Sama_3568	0.64	+0.9
4,203,122	-		Sama_3568	0.64	+0.0
4,203,126	+		Sama_3568	0.65	-0.8
4,203,126	+		Sama_3568	0.65	+0.1
4,203,127	-		Sama_3568	0.65	-0.4
4,203,127	-		Sama_3568	0.65	-1.7
4,203,127	-		Sama_3568	0.65	-0.8
4,203,163	-		Sama_3568	0.69	+1.0
4,203,175	+		Sama_3568	0.71	+0.2
4,203,192	+		Sama_3568	0.73	-0.5
4,203,200	+		Sama_3568	0.74	-0.7
4,203,200	+		Sama_3568	0.74	-0.9
4,203,200	+		Sama_3568	0.74	+0.3
4,203,201	-		Sama_3568	0.75	-1.1
4,203,201	-		Sama_3568	0.75	-0.4
4,203,207	+		Sama_3568	0.75	+1.8
4,203,207	+		Sama_3568	0.75	-1.7
4,203,208	-		Sama_3568	0.76	-1.1
4,203,208	-		Sama_3568	0.76	+0.3
4,203,208	-		Sama_3568	0.76	+0.3
4,203,208	-		Sama_3568	0.76	-1.2
4,203,215	+		Sama_3568	0.76	-0.6
4,203,215	+		Sama_3568	0.76	-0.5
4,203,215	+		Sama_3568	0.76	+0.9
4,203,215	+		Sama_3568	0.76	+0.0
4,203,216	-		Sama_3568	0.77	-1.8
4,203,216	-		Sama_3568	0.77	+0.7
4,203,216	-		Sama_3568	0.77	-2.6
4,203,216	-		Sama_3568	0.77	+0.6
4,203,216	-		Sama_3568	0.77	+0.4
4,203,216	-		Sama_3568	0.77	+0.5
4,203,234	+		Sama_3568	0.79	-2.3
4,203,234	+		Sama_3568	0.79	-1.0
4,203,234	+		Sama_3568	0.79	-1.5
4,203,234	+		Sama_3568	0.79	-0.5
4,203,234	+		Sama_3568	0.79	-0.9
4,203,234	+		Sama_3568	0.79	-1.2
4,203,235	-		Sama_3568	0.79	-1.2
4,203,235	-		Sama_3568	0.79	+0.8
4,203,235	-		Sama_3568	0.79	+0.3
4,203,248	+		Sama_3568	0.81	-0.3
4,203,249	-		Sama_3568	0.81	+1.2
4,203,269	+		Sama_3568	0.84	-0.1
4,203,270	-		Sama_3568	0.84	+0.0
4,203,270	-		Sama_3568	0.84	+0.1
4,203,405	+				+1.1
4,203,412	+				+0.4
4,203,413	-				+0.8
4,203,413	-				+0.1
4,203,413	-				-0.7
4,203,413	-				-0.2
4,203,453	+				-1.8
4,203,454	-				+0.6
4,203,454	-				-0.6
4,203,469	+				-0.2
4,203,469	+				+0.3
4,203,469	+				+2.1
4,203,469	+				+1.3
4,203,469	+				-0.8
4,203,469	+				-0.8
4,203,469	+				+0.2
4,203,470	-				-1.2
4,203,470	-				-1.1
4,203,470	-				-0.5
4,203,470	-				-0.9
4,203,470	-				-0.0
4,203,470	-				+0.4
4,203,470	-				-0.5
4,203,470	-				+0.1
4,203,479	+				+0.6
4,203,479	+				-0.4
4,203,479	+				-0.2
4,203,479	+				+0.1
4,203,480	-				+0.1
4,203,480	-				+0.6
4,203,480	-				+1.4
4,203,480	-				+0.4
4,203,480	-				+0.1
4,203,480	-				+0.1
4,203,480	-				+2.7
4,203,480	-				+0.4
4,203,502	+				+0.7
4,203,537	-				+0.7
4,203,537	-				+0.2
4,203,547	+				+0.3
4,203,547	+				+0.1
4,203,547	+				+0.1
4,203,548	-				+0.1
4,203,548	-				+0.2
4,203,567	+				+0.7
4,203,568	-				-0.1
4,203,568	-				+0.5
4,203,576	+				-0.5
4,203,611	+				-1.2
4,203,611	+				+0.5
4,203,611	+				+0.3
4,203,611	+				+0.5
4,203,611	+				+0.5
4,203,611	+				+0.4
4,203,612	-				+0.6
4,203,612	-				+0.1
4,203,612	-				-1.4
4,203,612	-				-0.1
4,203,612	-				+0.4
4,203,612	-				-0.5
4,203,612	-				+0.3
4,203,612	-				+1.4
4,203,641	+				-0.8
4,203,726	-				+1.1
4,203,761	+				+0.9
4,203,761	+				+0.1
4,203,762	-				-0.0
4,203,762	-				+0.4
4,203,762	-				+0.4
4,203,794	+				+0.2
4,203,795	-				+1.3
4,203,809	+				+0.1
4,203,809	+				+0.5
4,203,809	+				-1.4
4,203,809	+				+0.5
4,203,810	-				+0.9
4,203,810	-				+0.2
4,203,810	-				+2.4
4,203,810	-				+1.3
4,203,810	-				+0.5
4,203,842	-				+0.4
4,203,842	-				+1.1
4,203,884	+		Sama_3569	0.11	-0.2
4,203,885	-		Sama_3569	0.11	+0.6
4,203,885	-		Sama_3569	0.11	+1.6
4,203,885	-		Sama_3569	0.11	+0.4
4,203,885	-		Sama_3569	0.11	-0.5
4,203,885	-		Sama_3569	0.11	-0.5
4,203,915	+		Sama_3569	0.13	-0.1
4,203,915	+		Sama_3569	0.13	-1.2
4,203,915	+		Sama_3569	0.13	+0.1
4,204,090	+		Sama_3569	0.21	-2.6
4,204,091	-		Sama_3569	0.21	+1.9
4,204,091	-		Sama_3569	0.21	+1.3
4,204,091	-		Sama_3569	0.21	+0.2
4,204,091	-		Sama_3569	0.21	+0.5
4,204,091	-		Sama_3569	0.21	+0.8
4,204,132	+		Sama_3569	0.23	+1.5
4,204,133	-		Sama_3569	0.23	-1.0
4,204,133	-		Sama_3569	0.23	+0.1
4,204,133	-		Sama_3569	0.23	+0.3
4,204,187	-		Sama_3569	0.25	+1.1
4,204,187	-		Sama_3569	0.25	+0.3
4,204,217	-		Sama_3569	0.27	+1.9
4,204,247	-		Sama_3569	0.28	-0.2
4,204,247	-		Sama_3569	0.28	-0.5
4,204,247	-		Sama_3569	0.28	+0.4
4,204,304	-		Sama_3569	0.30	-1.9
4,204,331	+		Sama_3569	0.32	+0.6
4,204,331	+		Sama_3569	0.32	-1.0
4,204,331	+		Sama_3569	0.32	+0.1
4,204,331	+		Sama_3569	0.32	+0.7
4,204,332	-		Sama_3569	0.32	-0.8
4,204,332	-		Sama_3569	0.32	+0.5
4,204,334	-		Sama_3569	0.32	-1.3
4,204,334	-		Sama_3569	0.32	-0.6
4,204,334	-		Sama_3569	0.32	+0.7
4,204,360	-		Sama_3569	0.33	+0.4
4,204,383	-		Sama_3569	0.34	-2.0
4,204,383	-		Sama_3569	0.34	-0.1