Strain Fitness in Shewanella amazonensis SB2B around Sama_2632

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
3,151,550	+		Sama_2631	0.64	-0.4
3,151,550	+		Sama_2631	0.64	+0.3
3,151,550	+		Sama_2631	0.64	-3.4
3,151,551	-		Sama_2631	0.64	-3.8
3,151,551	-		Sama_2631	0.64	-2.3
3,151,551	-		Sama_2631	0.64	-0.9
3,151,551	-		Sama_2631	0.64	-2.5
3,151,553	+		Sama_2631	0.64	-3.5
3,151,553	+		Sama_2631	0.64	-2.1
3,151,553	+		Sama_2631	0.64	-4.4
3,151,553	+		Sama_2631	0.64	-2.8
3,151,553	+		Sama_2631	0.64	-0.9
3,151,554	-		Sama_2631	0.64	-4.1
3,151,554	-		Sama_2631	0.64	-2.1
3,151,554	-		Sama_2631	0.64	-3.2
3,151,554	-		Sama_2631	0.64	-2.1
3,151,554	-		Sama_2631	0.64	-2.6
3,151,554	-		Sama_2631	0.64	-2.8
3,151,593	-		Sama_2631	0.66	-3.2
3,151,643	+		Sama_2631	0.69	-1.9
3,151,643	+		Sama_2631	0.69	-2.9
3,151,644	-		Sama_2631	0.69	-1.6
3,151,644	-		Sama_2631	0.69	-1.6
3,151,666	-		Sama_2631	0.70	-1.9
3,151,716	+		Sama_2631	0.73	-0.3
3,151,716	+		Sama_2631	0.73	-1.6
3,151,716	+		Sama_2631	0.73	-0.9
3,151,716	+		Sama_2631	0.73	-3.1
3,151,716	+		Sama_2631	0.73	-1.9
3,151,716	+		Sama_2631	0.73	+0.7
3,151,716	+		Sama_2631	0.73	-1.5
3,151,716	+		Sama_2631	0.73	-2.6
3,151,716	+		Sama_2631	0.73	-4.0
3,151,716	+		Sama_2631	0.73	-3.6
3,151,716	+		Sama_2631	0.73	-4.4
3,151,716	+		Sama_2631	0.73	-2.6
3,151,716	+		Sama_2631	0.73	-2.9
3,151,717	-		Sama_2631	0.73	-0.9
3,151,717	-		Sama_2631	0.73	-3.8
3,151,717	-		Sama_2631	0.73	-0.3
3,151,717	-		Sama_2631	0.73	-2.6
3,151,717	-		Sama_2631	0.73	-3.6
3,151,717	-		Sama_2631	0.73	-2.1
3,151,717	-		Sama_2631	0.73	-3.0
3,151,717	-		Sama_2631	0.73	-2.5
3,151,717	-		Sama_2631	0.73	-3.1
3,151,717	-		Sama_2631	0.73	-3.9
3,151,717	-		Sama_2631	0.73	-4.6
3,151,794	+		Sama_2631	0.77	+0.7
3,151,795	-		Sama_2631	0.77	-3.2
3,151,867	+		Sama_2631	0.81	-2.6
3,151,867	+		Sama_2631	0.81	-1.6
3,151,867	+		Sama_2631	0.81	-3.7
3,151,867	+		Sama_2631	0.81	-2.8
3,151,867	+		Sama_2631	0.81	-2.5
3,151,868	-		Sama_2631	0.81	-3.0
3,151,868	-		Sama_2631	0.81	-0.3
3,151,868	-		Sama_2631	0.81	-3.4
3,151,906	+		Sama_2631	0.83	-4.0
3,151,906	+		Sama_2631	0.83	-3.6
3,151,907	-		Sama_2631	0.83	-2.8
3,151,907	-		Sama_2631	0.83	-1.9
3,151,907	-		Sama_2631	0.83	-3.2
3,151,907	-		Sama_2631	0.83	-3.8
3,151,907	-		Sama_2631	0.83	-1.6
3,151,907	-		Sama_2631	0.83	-4.6
3,151,907	-		Sama_2631	0.83	-4.1
3,151,907	-		Sama_2631	0.83	-2.5
3,151,907	-		Sama_2631	0.83	+0.7
3,151,907	-		Sama_2631	0.83	+0.0
3,151,907	-		Sama_2631	0.83	-3.6
3,151,908	+		Sama_2631	0.83	-2.5
3,151,908	+		Sama_2631	0.83	-3.3
3,151,908	+		Sama_2631	0.83	-2.6
3,151,909	-		Sama_2631	0.83	-2.1
3,151,914	+		Sama_2631	0.83	-0.9
3,151,914	+		Sama_2631	0.83	-2.3
3,151,914	+		Sama_2631	0.83	-2.5
3,151,915	-		Sama_2631	0.83	-2.3
3,151,915	-		Sama_2631	0.83	-2.6
3,151,974	+		Sama_2631	0.86	-2.6
3,151,975	-		Sama_2631	0.86	-4.6
3,151,975	-		Sama_2631	0.86	-4.0
3,151,975	-		Sama_2631	0.86	-4.4
3,152,018	-		Sama_2631	0.88	-2.6
3,152,116	-				-3.6
3,152,252	-				-3.6
3,152,337	+				-1.9
3,152,337	+				-2.1
3,152,337	+				-3.1
3,152,337	+				-2.1
3,152,337	+				-3.4
3,152,337	+				-1.6
3,152,338	-				-2.1
3,152,338	-				-3.6
3,152,338	-				-2.9
3,152,338	-				-3.0
3,152,339	+				-3.1
3,152,339	+				-0.3
3,152,340	-				-3.4
3,152,340	-				-4.9
3,152,340	-				-3.5
3,152,366	+				-3.9
3,152,366	+				-3.1
3,152,367	-				-3.8
3,152,367	-				-0.2
3,152,367	-				-5.9
3,152,383	+				-3.6
3,152,383	+				-2.3
3,152,384	-				-2.5
3,152,410	-				-2.1
3,152,461	+				-3.3
3,152,462	-				+1.3
3,152,462	-				-2.1
3,152,494	+				-2.8
3,152,494	+				-2.6
3,152,496	+				-3.2
3,152,497	-				-2.1
3,152,504	+				-3.9
3,152,505	-				-3.8
3,152,505	-				-0.9
3,152,513	-				+0.1
3,152,581	+				-0.2
3,152,605	+				+0.5
3,152,605	+				+1.3
3,152,606	-				-1.2
3,152,606	-				+2.0
3,152,606	-				-2.6
3,152,615	-		Sama_2632	0.11	-0.8
3,152,615	-		Sama_2632	0.11	-1.4
3,152,615	-		Sama_2632	0.11	-0.9
3,152,650	+		Sama_2632	0.16	+0.6
3,152,650	+		Sama_2632	0.16	+0.4
3,152,650	+		Sama_2632	0.16	+0.7
3,152,651	-		Sama_2632	0.16	+0.7
3,152,651	-		Sama_2632	0.16	+0.8
3,152,651	-		Sama_2632	0.16	-1.9
3,152,651	-		Sama_2632	0.16	-0.2
3,152,651	-		Sama_2632	0.16	-0.9
3,152,651	-		Sama_2632	0.16	-0.1
3,152,651	-		Sama_2632	0.16	-0.2
3,152,748	-		Sama_2632	0.32	+0.2
3,152,765	-		Sama_2632	0.34	-0.0
3,152,862	+		Sama_2632	0.50	-0.3
3,152,920	+		Sama_2632	0.59	+0.4
3,152,939	-		Sama_2632	0.62	-0.9
3,152,939	-		Sama_2632	0.62	+1.2
3,152,939	-		Sama_2632	0.62	-0.0
3,152,976	-		Sama_2632	0.68	-0.7
3,153,039	-		Sama_2632	0.78	-1.1
3,153,058	+		Sama_2632	0.81	+1.3
3,153,128	+				-0.3
3,153,129	-				-0.7
3,153,132	+				+0.6
3,153,133	-				+0.9
3,153,170	+				-0.5
3,153,170	+				+0.7
3,153,170	+				+0.4
3,153,171	-				+0.2
3,153,222	-				-0.5
3,153,222	-				-0.3
3,153,251	+				+1.0
3,153,281	+		Sama_2633	0.17	+1.5
3,153,282	-		Sama_2633	0.17	-0.7
3,153,282	-		Sama_2633	0.17	+1.3
3,153,290	-		Sama_2633	0.19	-0.2
3,153,290	-		Sama_2633	0.19	+1.0
3,153,290	-		Sama_2633	0.19	-1.6
3,153,290	-		Sama_2633	0.19	-0.1
3,153,310	-		Sama_2633	0.25	-1.9
3,153,318	+		Sama_2633	0.28	+0.3
3,153,355	-		Sama_2633	0.38	-1.3
3,153,411	-		Sama_2633	0.54	+1.3
3,153,411	-		Sama_2633	0.54	-3.8
3,153,421	-		Sama_2633	0.57	+0.0
3,153,421	-		Sama_2633	0.57	-0.7
3,153,500	+		Sama_2633	0.80	+0.0
3,153,557	+				+0.7
3,153,557	+				+0.6
3,153,557	+				-1.3
3,153,557	+				+0.8
3,153,558	-				-1.6
3,153,558	-				-0.3
3,153,558	-				-0.1
3,153,558	-				-1.3
3,153,558	-				-2.1
3,153,558	-				+0.1
3,153,558	-				+0.0
3,153,558	-				-1.3
3,153,561	-				-2.5
3,153,561	-				+1.0
3,153,561	-				-1.0
3,153,579	-				+0.5
3,153,639	+				+0.6
3,153,640	-				-0.2
3,153,647	+				+1.8
3,153,664	-				-0.5
3,153,668	+				+1.9
3,153,668	+				-0.9
3,153,669	-				+0.7
3,153,725	+				-0.4
3,153,725	+				+0.2
3,153,737	+				+1.1
3,153,737	+				-0.6
3,153,737	+				-0.4
3,153,738	-				+0.0
3,153,739	+				-1.4
3,153,739	+				+1.0
3,153,739	+				+0.4
3,153,739	+				+1.4
3,153,739	+				+1.0
3,153,740	-				+0.2
3,153,740	-				-3.2
3,153,740	-				-0.8
3,153,740	-				-1.6
3,153,740	-				+0.9
3,153,740	-				-2.0
3,153,740	-				-1.5
3,153,740	-				+0.2
3,153,749	-				-1.3
3,153,798	+				+0.3
3,153,798	+				-0.6
3,153,799	-				+1.7
3,153,799	-				-1.2
3,153,799	-				+0.2
3,153,799	-				-0.4
3,153,802	+				+0.0
3,153,802	+				+0.1
3,153,802	+				+0.5
3,153,803	-				-0.5
3,153,882	+				-0.5
3,153,882	+				+0.6
3,153,882	+				+0.5
3,153,882	+				+0.8
3,153,882	+				+0.0
3,153,882	+				-0.3
3,153,883	-				+0.7
3,153,883	-				-0.7
3,153,883	-				-1.5
3,153,890	+				+1.0
3,153,969	+		Sama_2634	0.10	+0.9
3,153,970	-		Sama_2634	0.11	-1.3
3,153,997	+		Sama_2634	0.12	+3.7
3,153,998	-		Sama_2634	0.12	+1.1
3,154,093	-		Sama_2634	0.17	-0.6
3,154,093	-		Sama_2634	0.17	+0.7
3,154,122	+		Sama_2634	0.19	-0.2
3,154,122	+		Sama_2634	0.19	-0.0
3,154,122	+		Sama_2634	0.19	+1.1
3,154,123	-		Sama_2634	0.19	+1.4
3,154,123	-		Sama_2634	0.19	-0.4
3,154,123	-		Sama_2634	0.19	+0.3
3,154,123	-		Sama_2634	0.19	-0.2
3,154,123	-		Sama_2634	0.19	+1.4
3,154,123	-		Sama_2634	0.19	+0.8
3,154,123	-		Sama_2634	0.19	-0.9
3,154,150	-		Sama_2634	0.20	-0.4