Strain Fitness in Shewanella oneidensis MR-1 around SO4153

Experiment: Aluminum chloride 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 4 mM
4,326,864	+		SO4151	0.73	+0.4
4,326,864	+		SO4151	0.73	+0.2
4,326,872	-		SO4151	0.74	-0.5
4,326,929	-		SO4151	0.79	+0.7
4,326,929	-		SO4151	0.79	+0.4
4,326,989	+		SO4151	0.85	+0.8
4,327,060	+				+0.6
4,327,060	+				+0.1
4,327,060	+				+0.4
4,327,068	-				-0.4
4,327,074	-				-0.3
4,327,201	-		SO4152	0.11	+0.3
4,327,230	-		SO4152	0.15	+0.6
4,327,289	+		SO4152	0.24	+0.4
4,327,385	-		SO4152	0.39	+0.4
4,327,400	+		SO4152	0.42	-0.9
4,327,408	-		SO4152	0.43	+1.2
4,327,429	+		SO4152	0.46	-0.1
4,327,489	-		SO4152	0.55	-1.1
4,327,493	+		SO4152	0.56	+0.2
4,327,501	-		SO4152	0.57	+0.4
4,327,528	+		SO4152	0.61	+1.2
4,327,528	+		SO4152	0.61	+0.6
4,327,536	-		SO4152	0.63	+0.4
4,327,555	+		SO4152	0.66	+0.2
4,327,596	+		SO4152	0.72	+0.4
4,327,596	+		SO4152	0.72	+0.4
4,327,596	+		SO4152	0.72	+0.2
4,327,596	+		SO4152	0.72	+1.5
4,327,596	+		SO4152	0.72	+0.3
4,327,596	+		SO4152	0.72	+0.4
4,327,604	-		SO4152	0.73	+0.7
4,327,604	-		SO4152	0.73	-0.7
4,327,611	-		SO4152	0.74	+0.3
4,327,611	-		SO4152	0.74	+0.1
4,327,611	-		SO4152	0.74	+0.7
4,327,611	-		SO4152	0.74	+0.2
4,327,630	+		SO4152	0.77	-1.9
4,327,638	-		SO4152	0.78	+0.2
4,327,648	-		SO4152	0.80	-2.5
4,327,648	-		SO4152	0.80	+0.5
4,327,690	+		SO4152	0.87	+0.6
4,327,690	+		SO4152	0.87	-0.0
4,327,690	+		SO4152	0.87	+0.9
4,327,698	+		SO4152	0.88	-0.2
4,327,698	+		SO4152	0.88	+0.3
4,327,698	-		SO4152	0.88	+0.5
4,327,721	-				+0.7
4,327,776	-				+0.2
4,327,925	+		SO4153	0.13	-0.3
4,327,950	+		SO4153	0.15	+0.8
4,328,099	-		SO4153	0.28	+0.8
4,328,142	-		SO4153	0.32	+0.3
4,328,142	-		SO4153	0.32	+0.1
4,328,216	+		SO4153	0.39	-0.1
4,328,279	+		SO4153	0.44	+0.4
4,328,474	+		SO4153	0.61	+0.4
4,328,482	-		SO4153	0.62	+1.0
4,328,482	-		SO4153	0.62	+0.4
4,328,536	-		SO4153	0.67	+0.4
4,328,755	-		SO4153	0.86	+1.3
4,328,780	+		SO4153	0.88	+0.6
4,328,788	-		SO4153	0.89	+0.3
4,328,788	-		SO4153	0.89	-0.8
4,328,803	-				+1.2
4,328,908	+				+0.2
4,328,916	-				+0.0
4,328,916	-				+0.1
4,328,918	-				+0.2
4,329,064	-				-0.7
4,329,278	+		SO4154	0.28	-0.1
4,329,286	-		SO4154	0.29	-1.3
4,329,332	-		SO4154	0.34	-0.2
4,329,360	-		SO4154	0.37	+0.2
4,329,398	+		SO4154	0.41	+1.0
4,329,505	+		SO4154	0.53	+0.5
4,329,505	+		SO4154	0.53	+0.1
4,329,505	+		SO4154	0.53	+0.8
4,329,505	+		SO4154	0.53	-0.1
4,329,505	+		SO4154	0.53	+0.2
4,329,505	+		SO4154	0.53	-0.1
4,329,505	+		SO4154	0.53	+0.4
4,329,513	-		SO4154	0.54	-0.6
4,329,513	-		SO4154	0.54	+0.1
4,329,513	-		SO4154	0.54	+0.2
4,329,513	-		SO4154	0.54	+0.5
4,329,596	-		SO4154	0.63	+0.3
4,329,596	-		SO4154	0.63	-1.4
4,329,774	-		SO4154	0.82	+1.0
4,329,791	+		SO4154	0.84	-2.3
4,329,823	-		SO4154	0.88	+0.7
4,329,823	-		SO4154	0.88	+0.4