Strain Fitness in Shewanella oneidensis MR-1 around SO3727

Experiment: Aluminum chloride 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 4 mM
3,870,288	+	cysN	SO3726	0.76	+0.5
3,870,288	+	cysN	SO3726	0.76	-0.2
3,870,288	+	cysN	SO3726	0.76	+1.1
3,870,288	+	cysN	SO3726	0.76	+0.0
3,870,296	-	cysN	SO3726	0.77	+0.1
3,870,296	-	cysN	SO3726	0.77	+0.0
3,870,438	+	cysN	SO3726	0.87	+0.7
3,870,439	-	cysN	SO3726	0.87	-0.1
3,870,518	-				-1.0
3,870,565	+				-0.6
3,870,574	-				+0.5
3,870,574	-				+0.0
3,870,974	+	cysD	SO3727	0.17	-0.4
3,870,974	+	cysD	SO3727	0.17	+0.8
3,870,982	-	cysD	SO3727	0.18	-0.1
3,871,082	-	cysD	SO3727	0.29	-0.1
3,871,228	-	cysD	SO3727	0.45	-0.1
3,871,306	-	cysD	SO3727	0.54	-0.1
3,871,364	+	cysD	SO3727	0.60	+0.2
3,871,404	-	cysD	SO3727	0.65	-0.1
3,871,404	-	cysD	SO3727	0.65	-0.2
3,871,404	-	cysD	SO3727	0.65	+0.2
3,871,428	-	cysD	SO3727	0.67	+0.0
3,871,505	+	cysD	SO3727	0.76	-0.5
3,871,719	+				-0.3
3,871,719	+				-0.2
3,871,719	+				+0.2
3,871,719	+				+0.2
3,871,727	-				+0.1
3,871,727	-				+0.0
3,871,740	-				-0.2
3,871,757	-				+0.3
3,871,767	-				+0.7
3,871,791	-				+0.2
3,871,829	+				+0.6
3,871,847	-				+0.4
3,871,870	-				+0.1
3,871,897	+	cobA	SO3728	0.11	+0.1
3,871,949	+	cobA	SO3728	0.17	+0.1
3,872,064	-	cobA	SO3728	0.31	+0.1
3,872,126	+	cobA	SO3728	0.39	+0.0
3,872,134	-	cobA	SO3728	0.40	-1.2
3,872,176	+	cobA	SO3728	0.45	+0.1
3,872,305	-	cobA	SO3728	0.60	-0.1
3,872,511	-	cobA	SO3728	0.85	+0.0
3,872,586	+				-1.0
3,872,590	+				+0.5
3,872,659	-				+1.2