Strain Fitness in Shewanella oneidensis MR-1 around SO3517

Experiment: Aluminum chloride 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 4 mM
3,670,412	+		SO3516	0.26	+0.1
3,670,414	-		SO3516	0.26	+0.1
3,670,420	-		SO3516	0.27	+0.4
3,670,432	+		SO3516	0.28	+0.5
3,670,510	-		SO3516	0.36	+0.0
3,670,533	+		SO3516	0.38	+0.4
3,670,533	+		SO3516	0.38	+0.5
3,670,581	+		SO3516	0.43	-0.4
3,670,599	+		SO3516	0.45	+0.6
3,670,599	+		SO3516	0.45	+0.0
3,670,607	-		SO3516	0.45	+0.2
3,670,616	-		SO3516	0.46	-0.3
3,670,616	-		SO3516	0.46	+0.3
3,670,644	-		SO3516	0.49	+0.4
3,670,927	+		SO3516	0.77	+0.3
3,670,935	-		SO3516	0.78	-0.2
3,670,979	-		SO3516	0.82	+1.2
3,671,050	+		SO3516	0.89	+0.1
3,671,058	-		SO3516	0.90	-0.5
3,671,109	+				-0.4
3,671,109	+				+0.5
3,671,137	+				-1.5
3,671,161	-				-0.7
3,671,163	-				+0.3
3,671,173	-				+0.3
3,671,223	+				+0.1
3,671,255	+				-0.2
3,671,333	+				-0.6
3,671,576	-	ndh	SO3517	0.17	-1.6
3,671,577	+	ndh	SO3517	0.17	-1.0
3,671,608	+	ndh	SO3517	0.19	-1.2
3,671,608	+	ndh	SO3517	0.19	-0.9
3,671,608	+	ndh	SO3517	0.19	-2.2
3,671,633	-	ndh	SO3517	0.21	-1.0
3,671,637	-	ndh	SO3517	0.21	-4.4
3,671,647	-	ndh	SO3517	0.22	-1.4
3,671,683	+	ndh	SO3517	0.25	-1.7
3,671,683	+	ndh	SO3517	0.25	-2.8
3,671,691	-	ndh	SO3517	0.26	-2.3
3,671,691	-	ndh	SO3517	0.26	-2.7
3,671,781	-	ndh	SO3517	0.33	-1.9
3,671,834	+	ndh	SO3517	0.37	-2.1
3,671,855	+	ndh	SO3517	0.38	-0.9
3,671,855	+	ndh	SO3517	0.38	-0.7
3,671,855	+	ndh	SO3517	0.38	-3.7
3,671,855	+	ndh	SO3517	0.38	-1.0
3,671,863	-	ndh	SO3517	0.39	-1.7
3,671,863	-	ndh	SO3517	0.39	-1.1
3,672,024	+	ndh	SO3517	0.51	-1.4
3,672,114	+	ndh	SO3517	0.58	-0.8
3,672,121	-	ndh	SO3517	0.59	-0.4
3,672,192	+	ndh	SO3517	0.64	-2.3
3,672,241	+	ndh	SO3517	0.68	-1.7
3,672,241	+	ndh	SO3517	0.68	-1.2
3,672,241	+	ndh	SO3517	0.68	-2.0
3,672,259	-	ndh	SO3517	0.70	-1.9
3,672,297	-	ndh	SO3517	0.73	-2.2
3,672,362	-	ndh	SO3517	0.78	-1.4
3,672,387	+	ndh	SO3517	0.80	-1.9
3,672,391	+	ndh	SO3517	0.80	-2.3
3,672,401	+	ndh	SO3517	0.81	-2.0
3,672,401	+	ndh	SO3517	0.81	-1.6
3,672,401	+	ndh	SO3517	0.81	-2.0
3,672,401	+	ndh	SO3517	0.81	-1.9
3,672,401	+	ndh	SO3517	0.81	-1.5
3,672,401	+	ndh	SO3517	0.81	-1.7
3,672,409	-	ndh	SO3517	0.81	-2.5
3,672,440	+	ndh	SO3517	0.84	-3.4
3,672,451	+	ndh	SO3517	0.84	-0.8
3,672,459	-	ndh	SO3517	0.85	-1.8
3,672,462	+	ndh	SO3517	0.85	-3.1
3,672,462	+	ndh	SO3517	0.85	-2.2
3,672,524	+				-1.8
3,672,572	-				-2.5
3,672,590	-				-1.3
3,672,595	-				-1.4
3,672,630	-				-2.4
3,672,692	-				-0.9
3,672,702	+				-2.0
3,672,702	+				-1.0
3,672,710	-				-2.2
3,672,710	-				-0.3
3,672,710	-				-1.6
3,672,724	-				-0.8
3,672,791	-				-0.2
3,672,793	+				-0.4