Strain Fitness in Shewanella oneidensis MR-1 around SO3106

Experiment: Aluminum chloride 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 4 mM
3,232,729	-	pspE-1	SO3105	0.42	+0.9
3,232,767	+	pspE-1	SO3105	0.51	+0.3
3,232,922	-				-0.1
3,232,964	-				+0.7
3,233,056	-				+1.0
3,233,057	+				+0.9
3,233,581	+				-0.0
3,233,783	-	aprE	SO3106	0.10	-0.4
3,233,804	-	aprE	SO3106	0.11	+1.5
3,233,887	+	aprE	SO3106	0.14	-0.1
3,233,921	-	aprE	SO3106	0.16	+0.1
3,233,983	+	aprE	SO3106	0.18	+0.2
3,234,048	+	aprE	SO3106	0.21	+0.4
3,234,048	+	aprE	SO3106	0.21	+1.5
3,234,056	-	aprE	SO3106	0.21	-0.1
3,234,056	-	aprE	SO3106	0.21	+0.1
3,234,056	-	aprE	SO3106	0.21	-0.0
3,234,071	-	aprE	SO3106	0.22	+0.0
3,234,264	-	aprE	SO3106	0.30	+0.2
3,234,269	-	aprE	SO3106	0.30	+0.7
3,234,284	+	aprE	SO3106	0.31	+0.3
3,234,294	+	aprE	SO3106	0.31	-0.3
3,234,294	+	aprE	SO3106	0.31	+1.3
3,234,573	+	aprE	SO3106	0.43	+0.1
3,234,755	-	aprE	SO3106	0.50	-1.0
3,234,957	+	aprE	SO3106	0.59	+0.4
3,235,160	+	aprE	SO3106	0.67	+0.4
3,235,229	-	aprE	SO3106	0.70	+0.9
3,235,295	+	aprE	SO3106	0.72	+0.6
3,235,317	+	aprE	SO3106	0.73	+0.6
3,235,400	-	aprE	SO3106	0.77	+0.3
3,235,438	+	aprE	SO3106	0.78	+0.6
3,235,438	+	aprE	SO3106	0.78	+0.1
3,235,541	+	aprE	SO3106	0.83	+0.1
3,235,585	+	aprE	SO3106	0.84	+0.2
3,235,585	+	aprE	SO3106	0.84	+0.9
3,235,585	+	aprE	SO3106	0.84	-0.4
3,235,658	-	aprE	SO3106	0.87	+0.4
3,235,679	-	aprE	SO3106	0.88	-0.1
3,235,800	+				+0.0
3,235,808	+				-0.3
3,235,844	+				-0.8
3,235,852	-				-0.3
3,235,852	-				+0.5
3,235,867	+				-0.9
3,236,009	+				+0.1
3,236,125	-				+0.7
3,236,254	-		SO3107	0.33	+0.2
3,236,266	+		SO3107	0.36	-0.5
3,236,405	+		SO3107	0.61	+0.3
3,236,589	+				+0.9
3,236,597	-				-0.1
3,236,623	+				+0.3
3,236,735	-				+0.4
3,236,746	+				+0.1
3,236,754	-				+0.4