Strain Fitness in Marinobacter adhaerens HP15 around HP15_3731

Experiment: m.b. benzoic 0.29 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3730 and HP15_3731 are separated by 135 nucleotidesHP15_3731 and HP15_3732 are separated by 281 nucleotides HP15_3730: HP15_3730 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor, at 3,950,858 to 3,952,411 _3730 HP15_3731: HP15_3731 - sulfide-quinone reductase, at 3,952,547 to 3,953,815 _3731 HP15_3732: HP15_3732 - metallo-beta-lactamase family protein, at 3,954,097 to 3,955,005 _3732 Position (kb) 3952 3953 3954Strain fitness (log2 ratio) -2 -1 0 1 2at 3951.556 kb on - strand, within HP15_3730at 3951.557 kb on + strand, within HP15_3730at 3951.588 kb on + strand, within HP15_3730at 3951.596 kb on - strand, within HP15_3730at 3951.596 kb on - strand, within HP15_3730at 3951.677 kb on + strand, within HP15_3730at 3951.679 kb on + strand, within HP15_3730at 3951.685 kb on - strand, within HP15_3730at 3951.687 kb on - strand, within HP15_3730at 3951.697 kb on - strand, within HP15_3730at 3951.718 kb on - strand, within HP15_3730at 3951.727 kb on - strand, within HP15_3730at 3951.800 kb on + strand, within HP15_3730at 3951.808 kb on - strand, within HP15_3730at 3951.851 kb on + strand, within HP15_3730at 3951.866 kb on + strand, within HP15_3730at 3952.125 kb on - strand, within HP15_3730at 3952.173 kb on + strand, within HP15_3730at 3952.173 kb on + strand, within HP15_3730at 3952.173 kb on + strand, within HP15_3730at 3952.173 kb on + strand, within HP15_3730at 3952.181 kb on - strand, within HP15_3730at 3952.181 kb on - strand, within HP15_3730at 3952.181 kb on - strand, within HP15_3730at 3952.181 kb on - strand, within HP15_3730at 3952.188 kb on + strand, within HP15_3730at 3952.196 kb on - strand, within HP15_3730at 3952.196 kb on - strand, within HP15_3730at 3952.337 kb on - strandat 3952.594 kb on - strandat 3952.601 kb on - strandat 3952.834 kb on + strand, within HP15_3731at 3952.900 kb on + strand, within HP15_3731at 3952.908 kb on - strand, within HP15_3731at 3952.908 kb on - strand, within HP15_3731at 3952.933 kb on + strand, within HP15_3731at 3952.983 kb on - strand, within HP15_3731at 3953.029 kb on + strand, within HP15_3731at 3953.089 kb on - strand, within HP15_3731at 3953.094 kb on - strand, within HP15_3731at 3953.124 kb on - strand, within HP15_3731at 3953.171 kb on - strand, within HP15_3731at 3953.213 kb on - strand, within HP15_3731at 3953.213 kb on - strand, within HP15_3731at 3953.245 kb on - strand, within HP15_3731at 3953.396 kb on + strand, within HP15_3731at 3953.431 kb on + strand, within HP15_3731at 3953.451 kb on + strand, within HP15_3731at 3953.480 kb on + strand, within HP15_3731at 3953.590 kb on + strand, within HP15_3731at 3953.598 kb on - strand, within HP15_3731at 3953.610 kb on - strand, within HP15_3731at 3953.637 kb on - strand, within HP15_3731at 3953.771 kb on + strandat 3953.824 kb on + strandat 3953.824 kb on + strandat 3953.824 kb on - strandat 3953.845 kb on + strandat 3954.221 kb on - strand, within HP15_3732at 3954.280 kb on + strand, within HP15_3732at 3954.342 kb on + strand, within HP15_3732at 3954.375 kb on - strand, within HP15_3732at 3954.375 kb on - strand, within HP15_3732at 3954.382 kb on - strand, within HP15_3732at 3954.387 kb on + strand, within HP15_3732at 3954.540 kb on - strand, within HP15_3732at 3954.540 kb on - strand, within HP15_3732at 3954.560 kb on + strand, within HP15_3732at 3954.560 kb on + strand, within HP15_3732at 3954.568 kb on - strand, within HP15_3732at 3954.568 kb on - strand, within HP15_3732at 3954.568 kb on - strand, within HP15_3732at 3954.588 kb on + strand, within HP15_3732at 3954.685 kb on - strand, within HP15_3732at 3954.701 kb on + strand, within HP15_3732at 3954.777 kb on - strand, within HP15_3732

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.29 mg/ml
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3,951,556 - HP15_3730 0.45 +0.2
3,951,557 + HP15_3730 0.45 +1.3
3,951,588 + HP15_3730 0.47 +0.8
3,951,596 - HP15_3730 0.47 -0.2
3,951,596 - HP15_3730 0.47 -0.0
3,951,677 + HP15_3730 0.53 +1.0
3,951,679 + HP15_3730 0.53 -0.1
3,951,685 - HP15_3730 0.53 +1.8
3,951,687 - HP15_3730 0.53 -0.7
3,951,697 - HP15_3730 0.54 +0.5
3,951,718 - HP15_3730 0.55 +0.8
3,951,727 - HP15_3730 0.56 +0.5
3,951,800 + HP15_3730 0.61 -0.0
3,951,808 - HP15_3730 0.61 -0.4
3,951,851 + HP15_3730 0.64 +0.5
3,951,866 + HP15_3730 0.65 -0.4
3,952,125 - HP15_3730 0.82 +0.6
3,952,173 + HP15_3730 0.85 -0.4
3,952,173 + HP15_3730 0.85 +0.5
3,952,173 + HP15_3730 0.85 +0.0
3,952,173 + HP15_3730 0.85 -0.2
3,952,181 - HP15_3730 0.85 -0.2
3,952,181 - HP15_3730 0.85 -0.1
3,952,181 - HP15_3730 0.85 -0.9
3,952,181 - HP15_3730 0.85 -0.7
3,952,188 + HP15_3730 0.86 +0.4
3,952,196 - HP15_3730 0.86 +0.5
3,952,196 - HP15_3730 0.86 -0.1
3,952,337 - +0.4
3,952,594 - +1.1
3,952,601 - +0.7
3,952,834 + HP15_3731 0.23 -0.7
3,952,900 + HP15_3731 0.28 -0.3
3,952,908 - HP15_3731 0.28 -0.1
3,952,908 - HP15_3731 0.28 -0.4
3,952,933 + HP15_3731 0.30 -0.7
3,952,983 - HP15_3731 0.34 +0.5
3,953,029 + HP15_3731 0.38 -1.1
3,953,089 - HP15_3731 0.43 -0.1
3,953,094 - HP15_3731 0.43 +0.4
3,953,124 - HP15_3731 0.45 -1.3
3,953,171 - HP15_3731 0.49 -0.1
3,953,213 - HP15_3731 0.52 -0.4
3,953,213 - HP15_3731 0.52 +0.2
3,953,245 - HP15_3731 0.55 -0.1
3,953,396 + HP15_3731 0.67 +0.4
3,953,431 + HP15_3731 0.70 +0.2
3,953,451 + HP15_3731 0.71 -0.6
3,953,480 + HP15_3731 0.74 +0.5
3,953,590 + HP15_3731 0.82 +0.3
3,953,598 - HP15_3731 0.83 -0.1
3,953,610 - HP15_3731 0.84 +0.4
3,953,637 - HP15_3731 0.86 -0.5
3,953,771 + +0.2
3,953,824 + +0.4
3,953,824 + -0.9
3,953,824 - +0.2
3,953,845 + -0.4
3,954,221 - HP15_3732 0.14 +0.5
3,954,280 + HP15_3732 0.20 -0.5
3,954,342 + HP15_3732 0.27 -2.2
3,954,375 - HP15_3732 0.31 -1.5
3,954,375 - HP15_3732 0.31 -0.2
3,954,382 - HP15_3732 0.31 +0.2
3,954,387 + HP15_3732 0.32 +0.7
3,954,540 - HP15_3732 0.49 +0.7
3,954,540 - HP15_3732 0.49 +0.0
3,954,560 + HP15_3732 0.51 +1.0
3,954,560 + HP15_3732 0.51 -0.1
3,954,568 - HP15_3732 0.52 +0.3
3,954,568 - HP15_3732 0.52 +0.8
3,954,568 - HP15_3732 0.52 -1.8
3,954,588 + HP15_3732 0.54 +0.4
3,954,685 - HP15_3732 0.65 +0.2
3,954,701 + HP15_3732 0.66 +0.6
3,954,777 - HP15_3732 0.75 +2.4

Or see this region's nucleotide sequence