Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2413 and Psest_2414 overlap by 1 nucleotides Psest_2414 and Psest_2415 are separated by 11 nucleotides Psest_2415 and Psest_2416 are separated by 67 nucleotides
Psest_2413: Psest_2413 - Periplasmic protein TonB, links inner and outer membranes, at 2,573,155 to 2,573,943
_2413
Psest_2414: Psest_2414 - TolR protein, at 2,573,943 to 2,574,407
_2414
Psest_2415: Psest_2415 - TolQ protein, at 2,574,419 to 2,575,132
_2415
Psest_2416: Psest_2416 - 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase), at 2,575,200 to 2,577,116
_2416
Position (kb)
2574
2575
2576 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2574.070 kb on + strand, within Psest_2414 at 2574.071 kb on - strand, within Psest_2414 at 2574.187 kb on + strand, within Psest_2414 at 2574.187 kb on + strand, within Psest_2414 at 2574.188 kb on - strand, within Psest_2414 at 2574.188 kb on - strand, within Psest_2414 at 2574.350 kb on - strand, within Psest_2414 at 2574.357 kb on + strand, within Psest_2414 at 2574.357 kb on + strand, within Psest_2414 at 2574.357 kb on + strand, within Psest_2414 at 2574.358 kb on - strand, within Psest_2414 at 2574.358 kb on - strand, within Psest_2414 at 2574.499 kb on - strand, within Psest_2415 at 2574.544 kb on - strand, within Psest_2415 at 2574.544 kb on - strand, within Psest_2415 at 2574.700 kb on + strand, within Psest_2415 at 2574.702 kb on + strand, within Psest_2415 at 2574.702 kb on + strand, within Psest_2415 at 2574.702 kb on + strand, within Psest_2415 at 2574.703 kb on - strand, within Psest_2415 at 2574.703 kb on - strand, within Psest_2415 at 2574.703 kb on - strand, within Psest_2415 at 2574.780 kb on + strand, within Psest_2415 at 2575.023 kb on + strand, within Psest_2415 at 2575.166 kb on + strand at 2575.243 kb on + strand at 2575.243 kb on + strand at 2575.243 kb on + strand at 2575.243 kb on + strand at 2575.243 kb on + strand at 2575.244 kb on - strand at 2575.244 kb on - strand at 2575.244 kb on - strand at 2575.249 kb on + strand at 2575.249 kb on + strand at 2575.249 kb on + strand at 2575.420 kb on + strand, within Psest_2416 at 2575.447 kb on + strand, within Psest_2416 at 2575.447 kb on + strand, within Psest_2416 at 2575.447 kb on + strand, within Psest_2416 at 2575.448 kb on - strand, within Psest_2416 at 2575.448 kb on - strand, within Psest_2416 at 2575.448 kb on - strand, within Psest_2416 at 2575.480 kb on + strand, within Psest_2416 at 2575.529 kb on - strand, within Psest_2416 at 2575.771 kb on + strand, within Psest_2416 at 2575.772 kb on - strand, within Psest_2416 at 2575.810 kb on + strand, within Psest_2416 at 2575.810 kb on + strand, within Psest_2416 at 2575.811 kb on - strand, within Psest_2416 at 2575.811 kb on - strand, within Psest_2416 at 2575.811 kb on - strand, within Psest_2416 at 2576.020 kb on + strand, within Psest_2416
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 2,574,070 + Psest_2414 0.27 +0.8 2,574,071 - Psest_2414 0.28 -1.2 2,574,187 + Psest_2414 0.52 -0.2 2,574,187 + Psest_2414 0.52 +0.2 2,574,188 - Psest_2414 0.53 -1.5 2,574,188 - Psest_2414 0.53 -0.2 2,574,350 - Psest_2414 0.88 -0.5 2,574,357 + Psest_2414 0.89 -0.3 2,574,357 + Psest_2414 0.89 -2.6 2,574,357 + Psest_2414 0.89 -0.2 2,574,358 - Psest_2414 0.89 -0.6 2,574,358 - Psest_2414 0.89 -1.6 2,574,499 - Psest_2415 0.11 +0.3 2,574,544 - Psest_2415 0.18 +1.6 2,574,544 - Psest_2415 0.18 +0.8 2,574,700 + Psest_2415 0.39 -1.0 2,574,702 + Psest_2415 0.40 +0.1 2,574,702 + Psest_2415 0.40 -0.1 2,574,702 + Psest_2415 0.40 -0.2 2,574,703 - Psest_2415 0.40 -0.2 2,574,703 - Psest_2415 0.40 +0.3 2,574,703 - Psest_2415 0.40 -0.4 2,574,780 + Psest_2415 0.51 +0.4 2,575,023 + Psest_2415 0.85 -0.2 2,575,166 + +1.8 2,575,243 + +0.0 2,575,243 + -0.7 2,575,243 + +1.4 2,575,243 + -0.8 2,575,243 + +0.0 2,575,244 - -1.7 2,575,244 - -1.1 2,575,244 - +0.3 2,575,249 + -0.9 2,575,249 + +0.1 2,575,249 + -2.0 2,575,420 + Psest_2416 0.11 +0.1 2,575,447 + Psest_2416 0.13 -0.7 2,575,447 + Psest_2416 0.13 -0.2 2,575,447 + Psest_2416 0.13 -1.2 2,575,448 - Psest_2416 0.13 -0.7 2,575,448 - Psest_2416 0.13 -0.2 2,575,448 - Psest_2416 0.13 +0.8 2,575,480 + Psest_2416 0.15 -0.7 2,575,529 - Psest_2416 0.17 -0.7 2,575,771 + Psest_2416 0.30 +2.2 2,575,772 - Psest_2416 0.30 +1.0 2,575,810 + Psest_2416 0.32 -0.3 2,575,810 + Psest_2416 0.32 +0.5 2,575,811 - Psest_2416 0.32 -1.2 2,575,811 - Psest_2416 0.32 -0.4 2,575,811 - Psest_2416 0.32 +0.3 2,576,020 + Psest_2416 0.43 +0.3
Or see this region's nucleotide sequence