Experiment: m.b. benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2284 and HP15_2285 are separated by 31 nucleotides HP15_2285 and HP15_2286 are separated by 19 nucleotides HP15_2286 and HP15_2287 are separated by 132 nucleotides
HP15_2284: HP15_2284 - heme exporter protein CcmC, at 2,406,488 to 2,407,231
_2284
HP15_2285: HP15_2285 - cytochrome c-type biogenesis protein CcmB, at 2,407,263 to 2,407,958
_2285
HP15_2286: HP15_2286 - heme exporter protein CcmA, at 2,407,978 to 2,408,616
_2286
HP15_2287: HP15_2287 - conserved hypothetical protein, at 2,408,749 to 2,410,131
_2287
Position (kb)
2407
2408
2409 Strain fitness (log2 ratio)
-2
-1
0
1 at 2408.748 kb on - strand at 2408.852 kb on - strand at 2408.900 kb on + strand, within HP15_2287 at 2409.181 kb on + strand, within HP15_2287 at 2409.186 kb on + strand, within HP15_2287 at 2409.198 kb on + strand, within HP15_2287 at 2409.198 kb on - strand, within HP15_2287 at 2409.201 kb on - strand, within HP15_2287 at 2409.260 kb on + strand, within HP15_2287 at 2409.330 kb on + strand, within HP15_2287 at 2409.376 kb on - strand, within HP15_2287 at 2409.413 kb on + strand, within HP15_2287 at 2409.509 kb on + strand, within HP15_2287
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.29 mg/ml remove 2,408,748 - +0.6 2,408,852 - -0.7 2,408,900 + HP15_2287 0.11 +0.3 2,409,181 + HP15_2287 0.31 -1.1 2,409,186 + HP15_2287 0.32 -0.2 2,409,198 + HP15_2287 0.32 -2.6 2,409,198 - HP15_2287 0.32 -0.5 2,409,201 - HP15_2287 0.33 +0.0 2,409,260 + HP15_2287 0.37 -0.5 2,409,330 + HP15_2287 0.42 +0.4 2,409,376 - HP15_2287 0.45 -0.6 2,409,413 + HP15_2287 0.48 -0.4 2,409,509 + HP15_2287 0.55 -0.7
Or see this region's nucleotide sequence