Strain Fitness in Marinobacter adhaerens HP15 around HP15_2285

Experiment: m.b. benzoic 0.29 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2283 and HP15_2284 are separated by 3 nucleotidesHP15_2284 and HP15_2285 are separated by 31 nucleotidesHP15_2285 and HP15_2286 are separated by 19 nucleotidesHP15_2286 and HP15_2287 are separated by 132 nucleotides HP15_2283: HP15_2283 - heme exporter protein D (cytochrome c-type biogenesis protein CcmD)-like protein, at 2,406,245 to 2,406,484 _2283 HP15_2284: HP15_2284 - heme exporter protein CcmC, at 2,406,488 to 2,407,231 _2284 HP15_2285: HP15_2285 - cytochrome c-type biogenesis protein CcmB, at 2,407,263 to 2,407,958 _2285 HP15_2286: HP15_2286 - heme exporter protein CcmA, at 2,407,978 to 2,408,616 _2286 HP15_2287: HP15_2287 - conserved hypothetical protein, at 2,408,749 to 2,410,131 _2287 Position (kb) 2407 2408Strain fitness (log2 ratio) -1 0 1at 2408.748 kb on - strandat 2408.852 kb on - strandat 2408.900 kb on + strand, within HP15_2287

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.29 mg/ml
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2,408,748 - +0.6
2,408,852 - -0.7
2,408,900 + HP15_2287 0.11 +0.3

Or see this region's nucleotide sequence