Strain Fitness in Marinobacter adhaerens HP15 around HP15_2180
Experiment: m.b. benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.29 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,291,063 | + | HP15_2179 | 0.56 | -0.5 | |
2,291,156 | - | HP15_2179 | 0.63 | -0.6 | |
2,291,156 | - | HP15_2179 | 0.63 | +1.1 | |
2,291,301 | - | HP15_2179 | 0.73 | -0.9 | |
2,291,405 | + | HP15_2179 | 0.80 | -0.7 | |
2,291,413 | - | HP15_2179 | 0.80 | +1.5 | |
2,291,575 | + | -0.5 | |||
2,291,667 | - | +0.7 | |||
2,291,667 | - | +0.8 | |||
2,292,186 | - | HP15_2180 | 0.32 | -0.6 | |
2,292,261 | + | HP15_2180 | 0.41 | +0.5 | |
2,292,417 | + | HP15_2180 | 0.58 | +0.8 | |
2,292,439 | - | HP15_2180 | 0.61 | +0.2 | |
2,292,540 | + | HP15_2180 | 0.72 | +1.2 | |
2,292,548 | - | HP15_2180 | 0.73 | +0.1 | |
2,292,558 | + | HP15_2180 | 0.74 | +0.8 | |
2,292,691 | + | HP15_2180 | 0.89 | +0.7 | |
2,292,737 | + | +0.1 | |||
2,292,759 | + | +0.5 | |||
2,292,766 | - | +0.0 | |||
2,292,802 | + | -0.2 | |||
2,292,807 | + | -0.0 | |||
2,292,869 | + | -0.2 | |||
2,293,003 | + | -0.8 | |||
2,293,025 | - | +0.2 | |||
2,293,150 | + | HP15_2181 | 0.13 | +0.6 | |
2,293,208 | + | HP15_2181 | 0.17 | -0.9 | |
2,293,208 | + | HP15_2181 | 0.17 | -0.1 | |
2,293,216 | - | HP15_2181 | 0.17 | -0.1 | |
2,293,216 | - | HP15_2181 | 0.17 | -0.1 | |
2,293,216 | - | HP15_2181 | 0.17 | -0.1 | |
2,293,395 | + | HP15_2181 | 0.27 | +0.6 | |
2,293,504 | + | HP15_2181 | 0.33 | -0.4 | |
2,293,788 | + | HP15_2181 | 0.48 | -0.1 |
Or see this region's nucleotide sequence