Strain Fitness in Marinobacter adhaerens HP15 around HP15_1736
Experiment: m.b. benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.29 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,833,821 | - | HP15_1734 | 0.85 | -1.5 | |
1,833,822 | - | HP15_1734 | 0.85 | -0.3 | |
1,834,259 | + | HP15_1735 | 0.36 | -2.5 | |
1,834,290 | + | HP15_1735 | 0.40 | -2.4 | |
1,834,295 | + | HP15_1735 | 0.41 | -0.7 | |
1,834,390 | - | HP15_1735 | 0.53 | -1.0 | |
1,834,747 | - | -0.3 | |||
1,834,812 | + | -0.9 | |||
1,834,919 | + | HP15_1736 | 0.25 | +0.8 | |
1,834,919 | + | HP15_1736 | 0.25 | -0.2 | |
1,835,374 | + | HP15_1737 | 0.11 | +1.2 | |
1,835,382 | - | HP15_1737 | 0.12 | +0.2 | |
1,835,382 | - | HP15_1737 | 0.12 | +0.0 | |
1,835,535 | + | HP15_1737 | 0.30 | -1.2 | |
1,835,536 | + | HP15_1737 | 0.31 | -0.5 | |
1,835,562 | + | HP15_1737 | 0.34 | -0.1 | |
1,835,635 | + | HP15_1737 | 0.43 | -0.1 | |
1,835,640 | + | HP15_1737 | 0.43 | +0.3 | |
1,835,640 | + | HP15_1737 | 0.43 | +0.3 | |
1,835,643 | - | HP15_1737 | 0.44 | -0.4 | |
1,835,648 | - | HP15_1737 | 0.44 | -0.9 | |
1,835,648 | - | HP15_1737 | 0.44 | -0.7 | |
1,835,648 | - | HP15_1737 | 0.44 | +1.8 | |
1,835,704 | + | HP15_1737 | 0.51 | +0.9 | |
1,835,877 | - | HP15_1737 | 0.72 | +0.3 | |
1,835,953 | + | HP15_1737 | 0.81 | -1.1 | |
1,836,055 | + | +1.6 | |||
1,836,140 | - | -0.8 | |||
1,836,145 | + | -0.5 |
Or see this region's nucleotide sequence