Strain Fitness in Marinobacter adhaerens HP15 around HP15_1736

Experiment: m.b. benzoic 0.29 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1734 and HP15_1735 are separated by 26 nucleotidesHP15_1735 and HP15_1736 are separated by 58 nucleotidesHP15_1736 and HP15_1737 are separated by 25 nucleotides HP15_1734: HP15_1734 - ABC-type multidrug transport system, ATPase component, at 1,833,037 to 1,833,957 _1734 HP15_1735: HP15_1735 - ABC transporter, permease protein, at 1,833,984 to 1,834,745 _1735 HP15_1736: HP15_1736 - protein containing DUF192, at 1,834,804 to 1,835,259 _1736 HP15_1737: HP15_1737 - enoyl-CoA hydratase/isomerase, at 1,835,285 to 1,836,106 _1737 Position (kb) 1834 1835 1836Strain fitness (log2 ratio) -2 -1 0 1 2at 1833.821 kb on - strand, within HP15_1734at 1833.822 kb on - strand, within HP15_1734at 1834.259 kb on + strand, within HP15_1735at 1834.290 kb on + strand, within HP15_1735at 1834.295 kb on + strand, within HP15_1735at 1834.390 kb on - strand, within HP15_1735at 1834.747 kb on - strandat 1834.812 kb on + strandat 1834.919 kb on + strand, within HP15_1736at 1834.919 kb on + strand, within HP15_1736at 1835.374 kb on + strand, within HP15_1737at 1835.382 kb on - strand, within HP15_1737at 1835.382 kb on - strand, within HP15_1737at 1835.535 kb on + strand, within HP15_1737at 1835.536 kb on + strand, within HP15_1737at 1835.562 kb on + strand, within HP15_1737at 1835.635 kb on + strand, within HP15_1737at 1835.640 kb on + strand, within HP15_1737at 1835.640 kb on + strand, within HP15_1737at 1835.643 kb on - strand, within HP15_1737at 1835.648 kb on - strand, within HP15_1737at 1835.648 kb on - strand, within HP15_1737at 1835.648 kb on - strand, within HP15_1737at 1835.704 kb on + strand, within HP15_1737at 1835.877 kb on - strand, within HP15_1737at 1835.953 kb on + strand, within HP15_1737at 1836.055 kb on + strandat 1836.140 kb on - strandat 1836.145 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.29 mg/ml
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1,833,821 - HP15_1734 0.85 -1.5
1,833,822 - HP15_1734 0.85 -0.3
1,834,259 + HP15_1735 0.36 -2.5
1,834,290 + HP15_1735 0.40 -2.4
1,834,295 + HP15_1735 0.41 -0.7
1,834,390 - HP15_1735 0.53 -1.0
1,834,747 - -0.3
1,834,812 + -0.9
1,834,919 + HP15_1736 0.25 +0.8
1,834,919 + HP15_1736 0.25 -0.2
1,835,374 + HP15_1737 0.11 +1.2
1,835,382 - HP15_1737 0.12 +0.2
1,835,382 - HP15_1737 0.12 +0.0
1,835,535 + HP15_1737 0.30 -1.2
1,835,536 + HP15_1737 0.31 -0.5
1,835,562 + HP15_1737 0.34 -0.1
1,835,635 + HP15_1737 0.43 -0.1
1,835,640 + HP15_1737 0.43 +0.3
1,835,640 + HP15_1737 0.43 +0.3
1,835,643 - HP15_1737 0.44 -0.4
1,835,648 - HP15_1737 0.44 -0.9
1,835,648 - HP15_1737 0.44 -0.7
1,835,648 - HP15_1737 0.44 +1.8
1,835,704 + HP15_1737 0.51 +0.9
1,835,877 - HP15_1737 0.72 +0.3
1,835,953 + HP15_1737 0.81 -1.1
1,836,055 + +1.6
1,836,140 - -0.8
1,836,145 + -0.5

Or see this region's nucleotide sequence