Strain Fitness in Dechlorosoma suillum PS around Dsui_3264

Experiment: Anaero. lactate (C), chlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3262 and Dsui_3263 are separated by 148 nucleotidesDsui_3263 and Dsui_3264 are separated by 20 nucleotidesDsui_3264 and Dsui_3265 overlap by 50 nucleotides Dsui_3262: Dsui_3262 - adenylate kinase family protein, at 3,502,551 to 3,503,204 _3262 Dsui_3263: Dsui_3263 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 3,503,353 to 3,504,132 _3263 Dsui_3264: Dsui_3264 - hypothetical protein, at 3,504,153 to 3,504,329 _3264 Dsui_3265: Dsui_3265 - tetraacyldisaccharide 4''-kinase, at 3,504,280 to 3,505,371 _3265 Position (kb) 3504 3505Strain fitness (log2 ratio) -1 0 1 2at 3503.242 kb on - strandat 3503.285 kb on - strandat 3503.285 kb on - strandat 3503.286 kb on - strandat 3503.300 kb on + strandat 3503.308 kb on - strandat 3503.308 kb on - strandat 3503.308 kb on - strandat 3503.331 kb on - strandat 3503.333 kb on - strandat 3503.333 kb on - strandat 3504.142 kb on - strandat 3504.167 kb on + strandat 3504.167 kb on + strandat 3504.175 kb on - strand, within Dsui_3264

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), chlorate electron acceptor
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3,503,242 - +1.8
3,503,285 - +0.7
3,503,285 - +0.7
3,503,286 - +1.4
3,503,300 + +0.5
3,503,308 - +1.2
3,503,308 - +0.4
3,503,308 - +0.7
3,503,331 - +0.9
3,503,333 - +1.1
3,503,333 - +0.9
3,504,142 - -0.3
3,504,167 + +1.3
3,504,167 + +1.3
3,504,175 - Dsui_3264 0.12 -0.0

Or see this region's nucleotide sequence